CX290131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290131 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.122e-61 Identity = 116/154 (75.32%), Postives = 129/154 (83.77%), Query Frame = 1 Query: 223 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXXKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEAVNGHLDILRPAIKNYGGSVEVLSVESGDCIVKYVGPDSIASGIRAAIKEKFPDIENVVFT 684 LYSA FDLT +NVDLVLEDVRP+LI+DGGN+ KLQGAC SCPSS+TTM+MGIERVLKEKFGDA+KDIRQV+DEEV++ TVEAVN HLDILRPAIKNYGGSVEVLSVE DC+VKYVGP+SI GI+AAIKEKF DI NV FT Sbjct: 77 LYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFT 230
BLAST of CX290131 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 247 LTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXXKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV-RETTVEAVNGHLDILRP-AIKNYGGSVEVLSVESGDCIVKYVGPDSIASGIRAAI----KEKFPDIENV 675 LT +NV+ VL+++RPYL++DGGN+ KLQGACGSCPSST TM MGIER L EK + + + + DEE E E + L+ +RP I GS++++ +E ++ GP + +R A+ +EK P I V Sbjct: 85 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVA-VEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAV 232
BLAST of CX290131 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 1 Query: 229 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXXKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV-RETTVEAVNGHLDILRPAIKNY-GGSVEVLSVESGDCIVKYVGPDSIASGIRAAI----KEKFPDIENV 675 +A Q LTA NV+ VL+ VRPYL ADGG++ KLQGACGSCPSS T+ GIER L EK D + + V D+E E E V L+ +RP + GG ++ L ++ V+ GP ++ +R A+ +EK P I+ V Sbjct: 69 TAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIV 222
BLAST of CX290131 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 247 LTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXXKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV--RETTVEAVNGHLDILRPAIKNY-GGSVEVLSVESGDCIVKYVGPDSIASGIRAAIKEK 654 LT +NV+ VL++VRP L+ADGGN+ KLQGACGSCPSS+ T+ MGIE L++K + I + Q + E E E + L LRP + GG +E++ ++ V+ GP + +R A+ +K Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPE-IMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQK 221 The following BLAST results are available for this feature:
BLAST of CX290131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290131 ID=CX290131; Name=CX290131; organism=Citrus clementina; type=EST; length=710bpback to top |