CX290136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 2.619e-61 Identity = 118/154 (76.62%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 42 VAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 +A EQLCYIPCNFCNI+LAV+VPCSSL DIVTVRCGHC+NLWSVNMAAA QSLS + QA +YA PE GSSS+ + KI + R T TE+R+VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF Sbjct: 6 MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNF---QATNYAVPE----YGSSSRSHTKIPS-RISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 151
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.909e-44 Identity = 96/171 (56.14%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 42 VAP-EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSL-SWQDVHHHQAPSYASPECRID-----------LGSSSKCNNKISAMR----TPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 +AP EQ+CY+ CNFCN +LAVSVP +S+L+IVTVRCGHC+NL SVN+ S + QD HHH C D SSSK +A + N+ E+ + RPPEKRQRVPSAYN+FIKEEI+RIKANNPDISHREAFSTAAKNWAH+P+IHF Sbjct: 5 IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHHLQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHF 175
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.216e-43 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 27 SCGIDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQD--VHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 S I APE +CY+ CNFCN + AVSVP +S+L+IVTVRCGHC++L SVN+ Q+L +D + + + + E + GSSS+ ++ M + + TE + RPPEKRQRVPSAYN+FIKEEI+RIKANNPDISHREAFSTAAKNWAHFP+IHF Sbjct: 2 SAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGSSSRYG-RVPMMFSKND--TEHMLHVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHF 159
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.085e-42 Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 36 IDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSY---ASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 +D + E++CY+ C+FC +LAVSVP +SL +VTVRCGHC+NL S+N+ + S +H P S R D SSS+ N +S ++ RPPEKRQRVPSAYN+FIKEEIQRIKA NP+ISHREAFSTAAKNWAHFPHIHF Sbjct: 3 VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSEN---IDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHF 158
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.010e-41 Identity = 96/188 (51.06%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNM--------AAAFQSLSW--------------QDVHHHQAPS-----YASPECRIDLGSSSKCNNKISA--MRTPTNKATEERV--------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 EQLCY+ CNFC+ +LAV VPCSSL VTVRCGHC+NL SVN+ A+ L + +V QAP+ ASP S+S C N A M + NKAT+ NR EKRQRVPSAYN+FIK+EIQRIKA+NPDI+HREAFS AAKNWAHFPHIHF Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHF 216
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 3.010e-41 Identity = 96/188 (51.06%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNM--------AAAFQSLSW--------------QDVHHHQAPS-----YASPECRIDLGSSSKCNNKISA--MRTPTNKATEERV--------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 EQLCY+ CNFC+ +LAV VPCSSL VTVRCGHC+NL SVN+ A+ L + +V QAP+ ASP S+S C N A M + NKAT+ NR EKRQRVPSAYN+FIK+EIQRIKA+NPDI+HREAFS AAKNWAHFPHIHF Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHF 216
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.548e-40 Identity = 93/188 (49.47%), Postives = 105/188 (55.85%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHH--HQAPSYASPECRIDL--------------------------GSSSKCNNKISAMRTPTNKATEERV---------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 EQLCY+ CN C+ +LAV VPCSSL VTVRCGHC+NL SVN+ + H PS SP L SSS C + AM+ P K ++ NRPPEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 210
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.548e-40 Identity = 93/188 (49.47%), Postives = 105/188 (55.85%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHH--HQAPSYASPECRIDL--------------------------GSSSKCNNKISAMRTPTNKATEERV---------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 EQLCY+ CN C+ +LAV VPCSSL VTVRCGHC+NL SVN+ + H PS SP L SSS C + AM+ P K ++ NRPPEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 210
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB1_ARATH (Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.826e-38 Identity = 87/165 (52.73%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRT-PT-------------NKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 + LCY+ CNFC +LAV+VP +SL VTVRCG C+NL SVNM + S Q SY +P+ ++ + N + M PT ++ + VNRPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 23 DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 187
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.069e-38 Identity = 99/218 (45.41%), Postives = 120/218 (55.05%), Query Frame = 3 Query: 21 MSSCGIDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNM--------------------------AAAF-QSLSWQDV---HHHQAP---SYASPECRIDL---------GSSSKCNNKIS-----AMRTPTNKA----------TEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 +++ D EQLCY+ C++C+ VL VSVP SSL + VTVRCGHCS+L +VNM AA F SL+ HHH S A+ ++ L S++ C N S A PT++ T V+NRPPEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 48 VAAAAADSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 265 The following BLAST results are available for this feature:
BLAST of CX290136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290136 ID=CX290136; Name=CX290136; organism=Citrus clementina; type=EST; length=504bpback to top |