CX290138

Overview
NameCX290138
Unique NameCX290138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14965 contig Ccv1_Contig14965:431..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.406e-88
Identity = 151/241 (62.66%), Postives = 182/241 (75.52%), Query Frame = 1
Query:    1 GKFCLQYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSGIR 723
            G  C +Y   N+DGVS+     M QDKV +ESW HLKDAIL+GGIPFN+A+GM AFEY   DPRFNK FN  M NH+++ M  ILE+YKGF  +  LVDVGG +G TL+ I SKYP +KGINFD PHVIE AP HP IEHV GDMF SVPKGDAIF+KWI HDW DEHC+K LKNCY+S+PEDGKVI+ E +LPE P++S+ +K   H+D +M+  NPGGKERT+ EF  LA  +GF GI+
Sbjct:  107 GPVC-KYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIK 346          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.906e-85
Identity = 144/234 (61.54%), Postives = 180/234 (76.92%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSG 717
            ++   N+DGVS+   L M QDKV +ESW HLKDA+LEGGIPFN+A+GM AFEY   DPRFNK FN  M NH+++IM  ILE Y+GF  +K +VDVGG  G TL  I SKYP IKGINFD PHVIE AP +P ++HV GDMF SVPKGDAIF+KWI HDW D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF G
Sbjct:  113 KFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRG 346          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.252e-85
Identity = 144/236 (61.02%), Postives = 179/236 (75.85%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSGIR 723
            ++   N DGVS+ P L M QDKV +ESW HLKDA+L+GGIPFN+A+GM AFEY   DPRFNK FN  M NH+++ M  ILE Y+GF  +K +VDVGG  G TL  I SKYP IKGINF+ PHV+E AP H  +EHV GDMF SVPKGDAIF+KWI HDW D+HC KLLKNCY+++P++GKVI+ E +LPE P+TS+ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF   R
Sbjct:  100 KFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.546e-85
Identity = 147/239 (61.51%), Postives = 178/239 (74.48%), Query Frame = 1
Query:    1 GKFCLQYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSG 717
            G  C ++   N++GVS+ P   M QDKV LESW HLKDA+LEGGIPFN+A+GM AFEY   DPRFNK FN  M +H+++ M  ILE+YKGF  +  +VDVGG  G  L  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPKGDAIF+KWI HDW DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G
Sbjct:  109 GPVC-KFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQG 346          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.614e-84
Identity = 143/236 (60.59%), Postives = 177/236 (75.00%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSGIR 723
            +Y V N+DGVS+     M QDKV +ESW HLKDA+L+GGIPFN+A+GM AFEY   DPRFNK FN  M +H+++ M  ILE+Y GF  +K LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF S+PK DA+F+KWI HDW DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G +
Sbjct:  113 KYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFK 348          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.132e-84
Identity = 142/232 (61.21%), Postives = 175/232 (75.43%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGF 711
            ++   N+DGVS+ P   M QDKV +ESW HL DA+++GGIPFN+A+GM AFEY   DPRFNK FN  M NH+++ M  ILE+Y GF  +K +VDVGG  G TL  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPKGDAIF+KWI HDW DEHC+K LKNCY ++P++GKVI+ E +LPE P+T + +K+  HIDV+M+  NPGGKERT+ EF  LA  AGF
Sbjct:  111 KFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGF 342          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.046e-83
Identity = 141/232 (60.78%), Postives = 175/232 (75.43%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGF 711
            ++   N+DGVS+ P   M QDKV +ESW HLKDA+L+GGIPFN+A+GM AFEY   DPRFNK FN  M NH+++ M  ILE+Y GF  +K +VDVGG  G TL  I SKYP IKGINFD PHV+E AP +P +EHV GDMF SVPKGDAIF+KWI HDW D HC+K LK CY+++PE+GKVI+ E +LPE P+T + +K+  HIDV+M+  NPGGKERT+ EF  LA  +GF
Sbjct:  111 KFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGF 342          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.046e-83
Identity = 144/241 (59.75%), Postives = 179/241 (74.27%), Query Frame = 1
Query:    1 GKFCLQYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSGIR 723
            G  C ++   N+DGVS+     M QDKV +ESW HLKDA+L+GGIPFN+A+GM AF+Y   DPRFNK FN  M +H+++ M  ILE+YKGF  +  +VDVGG  G  +  I SKYP IKGINFD PHVIE AP +P ++HV GDMF SVPKGDAIF+KWI HDW DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   HIDV+M+  NPGGKERT+ EF  LA G+GF GIR
Sbjct:  109 GPVC-KFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIR 348          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.366e-83
Identity = 143/234 (61.11%), Postives = 175/234 (74.79%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSG 717
            ++   N+DGVS+ P   M QDKV +ESW +LKDAIL+GGIPFN+A+GM AFEY   DPRFNK FN  M +H+++ M  ILE+YKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPK DA+F+KWI HDW D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT+ EF  LA GAGF G
Sbjct:  113 KFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQG 346          
BLAST of CX290138 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.784e-83
Identity = 143/234 (61.11%), Postives = 174/234 (74.36%), Query Frame = 1
Query:   16 QYYVPNKDGVSLGPALQMIQDKVFLESWSHLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTXNPGGKERTKHEFMTLATGAGFSG 717
            ++   N+DGVS+ P   M QDKV +ESW +LKDAILEGGIPFN+A+GM AFEY   DPRFNK FN  M +H+++ M  ILE+YKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVP  DA+F+KWI HDW D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT+ EF  LA GAGF G
Sbjct:  113 KFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQG 346          
The following BLAST results are available for this feature:
BLAST of CX290138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
OMT1_ARATH2.406e-8862.66Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CATRO1.906e-8561.54Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA3.252e-8561.02Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_PRUDU5.546e-8561.51Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_MEDSA1.614e-8460.59Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_OCIBA6.132e-8461.21Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_OCIBA1.046e-8360.78Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_ROSCH1.046e-8359.75Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPTM1.366e-8361.11Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI1.784e-8361.11Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02020H05SK IF1 Citrus clementina cDNA clone C02020H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290138 ID=CX290138; Name=CX290138; organism=Citrus clementina; type=EST; length=730bp
GGTAAATTCTGTCTCCAATACTATGTGCCTAACAAAGATGGCGTCTCACT
AGGCCCCGCATTGCAAATGATTCAGGACAAGGTCTTTCTGGAGAGCTGGT
CCCATCTCAAAGATGCTATTCTTGAAGGAGGAATTCCATTTAATCGAGCC
CATGGAATGCATGCATTTGAGTACGGACGAGTGGACCCTAGGTTCAATAA
ACATTTTAACACAGCAATGTATAACCATACCTCTCTGATTATGAGCAACA
TTCTTGAATCTTACAAGGGCTTCGCCAACATCAAGCAACTGGTCGATGTT
GGTGGCAATCTCGGCGTTACTCTTCAAGCCATCACTTCCAAGTACCCCTA
TATTAAGGGCATCAATTTCGACCAGCCTCATGTTATTGAGCATGCCCCAC
TACATCCACATATTGAGCATGTAGCGGGTGATATGTTTCAAAGTGTTCCA
AAAGGTGACGCCATTTTTCTGAAGTGGATACTGCACGATTGGGACGATGA
ACATTGCTTGAAGTTGTTGAAGAATTGCTACAAAAGCGTTCCAGAAGATG
GAAAGGTAATCGTTGTGGAGTTAATGCTTCCAGAAGTTCCTAATACAAGC
ATTGAATCAAAATCAAATTCCCATATTGACGTGCTTATGATGACTCANAA
TCCCGGTGGAAAGGAGAGAACAAAGCATGAATTCATGACCCTGGCTACTG
GCGCTGGTTTTAGTGGGATCAGATTTGATC
back to top