CX290245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36 Identity = 96/244 (39.34%), Postives = 135/244 (55.33%), Query Frame = 1 Query: 25 LKKLCAAMGNLIKLHHLNNSNTSSLEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRWTRNTN----GSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHLVVCGMSSVRRFDPEFY---GKVASIPFPCLETLCFEDMEEWEDWIPHGSGQGVEGFPKLREL 735 L L ++ LI L L+ T L EMP GI +L LQ L NFV+G+ SG+ L ELK L+ L GTL IS L+NV +A+DA L RK L L L+WT + GS + VL ML+PH +L+ FCI Y G F WLG+SS + ++ C++C +LP VGQLPSLK+L + + +++ +F+ +PF L+ L F M W++WI G+ FP L++L Sbjct: 632 LTSLPKSIAELINLRLLDLVGTP-LVEMPPGIKKLRSLQKLSNFVIGRLSGAGLHELKELSHLRGTLRISELQNVAFASEAKDAGLKRKPFLDGLILKWTVKGSGFVPGSFNALACDQKEVLRMLEPHPHLKTFCIESYQGGAFPKWLGDSSFFGITSVTLSSCNLCISLPPVGQLPSLKYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPELEDGI--FPCLQKL 872
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34 Identity = 86/247 (34.82%), Postives = 132/247 (53.44%), Query Frame = 1 Query: 25 LKKLCAAMGNLIKLHHLNNSNTSSLEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRW----TRNTNGSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHLVVCGMSSVRRFDPEFYGKVASI------PFPCLETLCFEDMEEWEDWIPHGSGQGVEGFPKLREL 735 LK+L + NLI L +L+ T L +MP GRL LQTL F V GSR+ EL L L G L I L+ V + DA +A L+ K++L+E+ W + + N ++ V + L+PH+++E+ I Y G F WL + S S +V ++ C CT+LP +GQLP LK L + GM ++ +FY + PF LETL F+++ +W++W+ +G + FP L++L Sbjct: 638 LKELPTDISNLINLRYLDLIGTK-LRQMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANLNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIVCIRLRECQYCTSLPSLGQLPCLKELHISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRG-DLFPSLKKL 882
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.752e-23 Identity = 75/216 (34.72%), Postives = 109/216 (50.46%), Query Frame = 1 Query: 94 SLEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRWTRNTNGSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHLVV-CGMSSVRRFDPEFY-GKVASIPFPCLETLCFEDMEEWEDWIPHGSGQGVEGFPKLREL 735 SL P IG LTCL++L FV+GK G +L ELK+L L G++ I+ L+ VK DA++A L K NL L L W + VL+ LKPH NL+ I+G+GG W+ S L N+V+++ C C+ LP G+LP L+ L + G + V + + G+ FP L L D + + +G + FP L E+ Sbjct: 607 SLTSTPPRIGLLTCLKSLSCFVIGKRKGHQLGELKNLN-LYGSISITKLDRVKKDTDAKEANLSAKANLHSLCLSWDLDGKHRYDSE------VLEALKPHSNLKYLEINGFGGIRLPDWMNQSVLKNVVSIRIRGCENCSCLPPFGELPCLESLELHTGSADVEYVEDNVHPGR-----FPSLRKLVIWDFSNLKGLL---KMEGEKQFPVLEEM 807
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23 Identity = 85/243 (34.98%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 31 KLCAAMGNLIKLHHLNN---SNTSSLEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRWTRNTNGSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHLVV----CGMSSVRRFDPEFY-GKVASIPFPCLETLCFEDMEEWEDWIPHGSGQGVEGFPKLREL 735 KLC KL L N + SL MP IG LTCL+TL FVVG+ G +L EL +L L G++ IS+LE VK+ DA++A L K NL L + W N VL+ LKPH NL I G+ G + W+ +S L N+V++ C+ LP G LP L+ L + + V D + + G I FP L L D + + +G E FP L E+ Sbjct: 584 KLCCLPKETSKLGSLRNLLLDGSQSLTCMPPRIGSLTCLKTLGQFVVGRKKGYQLGELGNLN-LYGSIKISHLERVKNDKDAKEANLSAKGNLHSLSMSWN---NFGPHIYESEEVKVLEALKPHSNLTSLKIYGFRGIHLPEWMNHSVLKNIVSILISNFRNCSCLPPFGDLPCLESLELHWGSADVEYVEEVDIDVHSGFPTRIRFPSLRKLDIWDFGSLKGLL---KKEGEEQFPVLEEM 819
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22 Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 97 LEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRWTRNTNGSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHL 558 L P IG LTCL+TL F+VG G +L ELK+L L G++ I++LE VK+ DAE A L K NL+ L + W N +R VL+ LKPH NL+ I +GG F +W+ +S L +++++ + C C LP G+LP L++L Sbjct: 609 LTSTPPRIGLLTCLKTLGFFIVGSKKGYQLGELKNLN-LCGSISITHLERVKNDTDAE-ANLSAKANLQSLSMSWD---NDGPNRYESKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWINHSVLEKVISVRIKSCKNCLCLPPFGELPCLENL 757
BLAST of CX290245 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 31 KLCAAMGNLIKLHHLNNSNTSSLEEMPVGIGRLTCLQTLCNFVVGKDSGSRLRELKSLTQLGGTLCISNLENVKHIIDAEDAQLDRKENLKELWLRWTRNTNGSSSRXXXXXXGVLDMLKPHKNLEQFCISGYGGTNFSTWLGNSSLSNLVTLKFEYCSMCTALPLVGQLPSLKHL 558 KLC+ + NL+ H L MP IG LTCL+TL FVVG+ G +L EL++L L G + I++LE VK+ ++A++A L K NL L + W R S VL+ LKPH NL+ I + G W+ +S L N+V++ C C+ LP G+LP L+ L Sbjct: 603 KLCS-LRNLVLDH-------CPLTSMPPRIGLLTCLKTLGYFVVGERKGYQLGELRNLN-LRGAISITHLERVKNDMEAKEANLSAKANLHSLSMSWDRPNRYESEEVK-----VLEALKPHPNLKYLEIIDFCGFCLPDWMNHSVLKNVVSILISGCENCSCLPPFGELPCLESL 764 The following BLAST results are available for this feature:
BLAST of CX290245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290245 ID=CX290245; Name=CX290245; organism=Citrus clementina; type=EST; length=735bpback to top |