CX290248

Overview
NameCX290248
Unique NameCX290248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM11_ARATH (Probable protein arginine N-methyltransferase 1.1 OS=Arabidopsis thaliana GN=PRMT1.1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.286e-43
Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 2
Query:   17 AQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            AQRNDYIHALVAYFDV+FT CHKL+GFSTGPKSRATHWKQTVLYLEDVLTICEGE I+G+++V+PNKKNPRD+DI L YSL G+H  ISR Q+YKMR
Sbjct:  294 AQRNDYIHALVAYFDVSFTMCHKLLGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR 390          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM12_ARATH (Probable protein arginine N-methyltransferase 1.2 OS=Arabidopsis thaliana GN=PRMT1.2 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.374e-41
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 2
Query:   17 AQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            AQRND+IHALVAYFDV+FT CHK MGFSTGPKSRATHWKQTVLYLEDVLTICEGE I+GS+T+A NKKNPRDVDI L YSL G+H  ISR  +YKMR
Sbjct:  270 AQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR 366          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM1_ORYSJ (Probable protein arginine N-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=PRMT1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.819e-41
Identity = 75/97 (77.32%), Postives = 87/97 (89.69%), Query Frame = 2
Query:   17 AQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            A+RNDYIHALVAYF+V+FTKCHK+MGFSTGP+S+ATHWKQTVLYLEDVLTICEGE I+GS+TV PNKKNPRD+DI L Y+L G    +SR Q+YKMR
Sbjct:  291 AERNDYIHALVAYFNVSFTKCHKMMGFSTGPRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR 387          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM1_ORYSI (Probable protein arginine N-methyltransferase 1 OS=Oryza sativa subsp. indica GN=PRMT1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.819e-41
Identity = 75/97 (77.32%), Postives = 87/97 (89.69%), Query Frame = 2
Query:   17 AQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            A+RNDYIHALVAYF+V+FTKCHK+MGFSTGP+S+ATHWKQTVLYLEDVLTICEGE I+GS+TV PNKKNPRD+DI L Y+L G    +SR Q+YKMR
Sbjct:  291 AERNDYIHALVAYFNVSFTKCHKMMGFSTGPRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR 387          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM8_DANRE (Protein arginine N-methyltransferase 8 OS=Danio rerio GN=prmt8 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.355e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            QRNDY+HALV YF++ FTKCHK  GFST P + +THWKQTV YLED LT+  GE I GS+TV PN+ N RD+D   +   +G+    +    YKMR
Sbjct:  324 QRNDYVHALVTYFNIEFTKCHKKTGFSTAPDAPSTHWKQTVFYLEDYLTVRRGEEILGSITVRPNENNERDLDFTFELDFKGQLCDAAISHDYKMR 419          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM8_MOUSE (Protein arginine N-methyltransferase 8 OS=Mus musculus GN=Prmt8 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.016e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            QRNDY+HALV YF++ FTKCHK MGFST P +  THWKQTV YLED LT+  GE I G++++ PN KN RD+D  +    +G+    S    YKMR
Sbjct:  299 QRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR 394          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM8_HUMAN (Protein arginine N-methyltransferase 8 OS=Homo sapiens GN=PRMT8 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.016e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            QRNDY+HALV YF++ FTKCHK MGFST P +  THWKQTV YLED LT+  GE I G++++ PN KN RD+D  +    +G+    S    YKMR
Sbjct:  299 QRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR 394          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM1_XENTR (Protein arginine N-methyltransferase 1 OS=Xenopus tropicalis GN=prmt1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.603e-24
Identity = 51/96 (53.12%), Postives = 68/96 (70.83%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            +RNDYIHALVAYF++ FT+CHK  GFST P+S  THWKQTV Y+ED LT+  GE I G++++ PN KN RD+D  +    +G+   +S    Y+MR
Sbjct:  256 KRNDYIHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTISMKPNAKNNRDLDFTVDIDFKGQLCELSCSTDYRMR 351          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM1B_XENLA (Protein arginine N-methyltransferase 1-B OS=Xenopus laevis GN=prmt1-B PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.441e-24
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            +RNDYIHA+VAYF++ FT+CHK  GFST P+S  THWKQTV Y+ED LT+  GE I G++++ PN KN RD+D  +    +G+   +S    Y+MR
Sbjct:  256 KRNDYIHAMVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTISMKPNAKNNRDLDFTVDIDFKGQLCELSCSTDYRMR 351          
BLAST of CX290248 vs. ExPASy Swiss-Prot
Match: ANM1_RAT (Protein arginine N-methyltransferase 1 OS=Rattus norvegicus GN=Prmt1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.800e-24
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 2
Query:   20 QRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYKMR 307
            +RNDY+HALVAYF++ FT+CHK  GFST P+S  THWKQTV Y+ED LT+  GE I G++ + PN KN RD+D  +    +G+   +S    Y+MR
Sbjct:  258 KRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR 353          
The following BLAST results are available for this feature:
BLAST of CX290248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ANM11_ARATH7.286e-4381.44Probable protein arginine N-methyltransferase 1.1 ... [more]
ANM12_ARATH1.374e-4181.44Probable protein arginine N-methyltransferase 1.2 ... [more]
ANM1_ORYSJ6.819e-4177.32Probable protein arginine N-methyltransferase 1 OS... [more]
ANM1_ORYSI6.819e-4177.32Probable protein arginine N-methyltransferase 1 OS... [more]
ANM8_DANRE2.355e-2555.21Protein arginine N-methyltransferase 8 OS=Danio re... [more]
ANM8_MOUSE4.016e-2555.21Protein arginine N-methyltransferase 8 OS=Mus musc... [more]
ANM8_HUMAN4.016e-2555.21Protein arginine N-methyltransferase 8 OS=Homo sap... [more]
ANM1_XENTR2.603e-2453.13Protein arginine N-methyltransferase 1 OS=Xenopus ... [more]
ANM1B_XENLA4.441e-2452.08Protein arginine N-methyltransferase 1-B OS=Xenopu... [more]
ANM1_RAT5.800e-2452.08Protein arginine N-methyltransferase 1 OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionC02022B06SK IF1 Citrus clementina cDNA clone C02022B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290248 ID=CX290248; Name=CX290248; organism=Citrus clementina; type=EST; length=570bp
GAATTCGGCACGAGGGGCACAACGTAATGATTACATCCATGCTCTTGTAG
CATATTTTGACGTAACCTTTACCAAGTGCCACAAATTAATGGGCTTCTCA
ACAGGTCCAAAATCACGGGCTACACATTGGAAGCAAACAGTTCTTTATCT
GGAAGATGTATTAACTATTTGTGAGGGGGAGGCAATAAGTGGGAGCTTGA
CTGTGGCGCCAAACAAAAAGAATCCACGAGATGTTGATATAATGCTGAAA
TATTCATTGCAGGGTAGGCATTCTGCTATTTCCAGGATCCAATATTACAA
GATGCGTTGAGTTTGGCCATTGTCAGCGATAACTTGTGTTCCCCCACCCC
GCCAAAAAAAAACAACCCCCCTCTCTCCGTCCCTTCTTTTAGTTCTCATT
GCTCCAGTATCTGGAAAAATGAGTTGGTTTTATTAAGTGTAACTTTGTCT
GTAGTTCGTATTTATTCTTTTTAACGTATGTTCCAGCTGATGGAAATGTA
TTCTTAAAATTTTGATATTTGTACCGCTGTACCAATTTTTCCCCTCCTAA
AAAAAAAAAAAAAAAAAAAA
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