CX290249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA1_ARATH (Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=LYSA1 PE=1 SV=1) HSP 1 Score: 413.69 bits (1062), Expect = 4.604e-115 Identity = 204/223 (91.48%), Postives = 211/223 (94.62%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKTN 686 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR QGFEV YLNIGGGLGIDYYH GAVLP P +LI+TVRELVLSR+LNLIIEPGRSLIANTCC VNHVTGVKTN Sbjct: 140 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTN 362
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA2_ARATH (Diaminopimelate decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=LYSA2 PE=2 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 2.985e-114 Identity = 203/223 (91.03%), Postives = 210/223 (94.17%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKTN 686 GCGAVLVSGNELRLAL AGFDPTKCIFNGNGK LEDLVLAAQEGVFVNVDSEFDL NIV ASRI+GK+VNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLD VKAHP ELKLVGAHCHLGSTITKVDIFRDAAVLM+ YID+IR QGFEV YLNIGGGLGIDYYH GAVLP P +LI+TVRELVLSR+LNLIIEPGRSLIANTCC VNHVTGVKTN Sbjct: 145 GCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTN 367
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_ORYSJ (Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza sativa subsp. japonica GN=LYSA PE=2 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 5.452e-108 Identity = 189/225 (84.00%), Postives = 209/225 (92.89%), Query Frame = 3 Query: 12 EGGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVKTN 686 E GCGAVLVSGNELRLALRAGFDPT+CIFNGNGK LEDLVLAA+ GVFVN+DSEFDLENIV A+R+AGKKV VLLRINPDVDPQVHPYVATGNK SKFGIRNEKLQWFLD++K++ N++ LVG HCHLGSTITKVDIFRDAA LMVNY+D+IRAQGFE++YLNIGGGLGIDY+HT AVLP P +LI+TVRELVLSR+L LIIEPGRSLIANTCC VN VTGVK+N Sbjct: 143 ELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVKSN 367
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_AQUAE (Diaminopimelate decarboxylase OS=Aquifex aeolicus GN=lysA PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.952e-37 Identity = 84/224 (37.50%), Postives = 134/224 (59.82%), Query Frame = 3 Query: 12 EGGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 E G GA +VSG EL LA +AG P + ++ G GK ++L A + + NV+S +L+ + + GKK + +R+NPDVDP+ HPY+ATG + SKFG+ + Q + N L++VG HCH+GS I + +R+A +V+ + + +GF++ YL+IGGGLGI Y P P++L D +++L+ + +I+EPGRS++ N L+ V +K Sbjct: 78 ELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLEN-LEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKE-PAPQDLADLLKDLLENVKAKIILEPGRSIMGNAGILITQVQFLK 299
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_PSEAE (Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa GN=lysA PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 84/222 (37.84%), Postives = 131/222 (59.01%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 G G +VS EL L AG DP K +F+G GK +D+ A + GV NV+S +LE + + G K V LR+NPDVD Q HPY++TG K +KFGI ++ + + A A + L+++G CH+GS +T+++ F DA ++ +D++ +G + +L++GGGLG+ Y P + I +RE + R+L L+ EPGRS++AN L+ V +K Sbjct: 75 GAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAE-AVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQP--PLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLK 293
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_ARCFU (Diaminopimelate decarboxylase OS=Archaeoglobus fulgidus GN=lysA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34 Identity = 88/232 (37.93%), Postives = 129/232 (55.60%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKL-----VGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTV------RELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 G GA + S EL LA AGF +FNGN K +++ + GV +VDS +L I ++ GK+V + R+NPDVDP+ HP +ATG + SKFGI +E ++ +A+ LKL VG HCH+GS I + F A +++ I G E+ ++++GGGLGIDY GA P P++L + R+ L+ + L +EPGRS++ NT L+ V VK Sbjct: 71 GFGADVFSDGELYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSVDSLDELRTISKIAKEVGKEVEIAFRVNPDVDPKTHPKIATGLRESKFGIPHEMVR------EAYEMALKLDGVVPVGIHCHIGSQILDLSPFVHALNKVMDIAVDIEKLGVELSFVDMGGGLGIDYEGKGA--PTPKDLASAILPEFEGRKADLTSDPQLWLEPGRSIVGNTTVLITRVNAVK 294
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMA (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A GN=lysA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 85/228 (37.28%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 G G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK +V LR+NPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A+G +++L++GGG+GI Y +P V++L+ +R L LI+EPGRSL+ N L+ V VK Sbjct: 67 GSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIA------YADALEAYRHAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDED--VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVK 285
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_METJA (Diaminopimelate decarboxylase OS=Methanocaldococcus jannaschii GN=lysA PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 80/229 (34.93%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFV-NVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKA--HPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLS-----RNLNLIIEPGRSLIANTCCLVNHVTGVK 680 GCGA +VSG EL +A + K +FNGN K E++++ + + NVDS +L I ++ G+ NV RINP+V+P+ HP ++TG K +KFG+ E + A+K + +VG HCH+GS +T + F + +++++ +++ +G E++ +N+GGGLGI YY + P ++L D + +L NLI+EPGRSL+A L+ V +K Sbjct: 88 GCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVES-GIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQI-PTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIK 314
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_NEIMB (Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup B GN=lysA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 86/228 (37.72%), Postives = 129/228 (56.58%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGV-FVNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAH------PNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 G G +VSG EL L AG D K IF+G GK ++ A GV N++S +++ I + GK V LRINPDVD + HPY++TG K +KFGI + DA++A+ PN LK++G CH+GS +T + +A ++ +D + A+G +++L++GGG+GI Y +P V++L+ +R L LI+EPGRSL+ N L+ V VK Sbjct: 67 GSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIA------YADALEAYHYAAQQPN-LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEN--VPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVK 285
BLAST of CX290249 vs. ExPASy Swiss-Prot
Match: DCDA_ZYMMO (Diaminopimelate decarboxylase OS=Zymomonas mobilis GN=lysA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.042e-31 Identity = 79/222 (35.59%), Postives = 120/222 (54.05%), Query Frame = 3 Query: 18 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVF-VNVDSEFDLENIVVASRIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDKIRAQGFEVDYLNIGGGLGIDYYHTGAVLPKPRNLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNHVTGVK 680 G GA +VS E+R A+ AG P + +F+G GK E++ A + G+ N++S ++E + + GKK V LRINPDVDP H +ATG ++KFGI E + + ++P+ LK+ G H+GS IT + F AA + I + G ++ ++GGGLG+ Y P + ++ + N LI EPGRSLIAN L++ V +K Sbjct: 78 GLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPS-LKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSVEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIK 298 The following BLAST results are available for this feature:
BLAST of CX290249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290249 ID=CX290249; Name=CX290249; organism=Citrus clementina; type=EST; length=687bpback to top |