CX290255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 6.085e-84 Identity = 139/232 (59.91%), Postives = 172/232 (74.14%), Query Frame = 3 Query: 30 TKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 725 TKY+Q F TQ +ACFWKQYWSYWR+PQYNAIRF MT+VI + FGLI+W G KT +QDL N FGAMY+ +FLG NA +V P I +ERTV+YRE+AAGM++A+PYA++QVA +MIG W + KF F+Y+M SFI FTLYGMM++ALTP Q+A I +SFFLS+WNLFSGFL+ R IP+WWRWYYW +PVAW LYGL+T QVGD +S+V I Sbjct: 1170 TKYAQSFSTQTKACFWKQYWSYWRHPQYNAIRFLMTVVIGVLFGLIFWQIGTKTENEQDLNNFFGAMYAAVLFLGALNAATVQPAIAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTLYGMMLMALTPNYQIAGICMSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAWTLYGLITSQVGDKDSMVHI 1401
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.148e-82 Identity = 136/232 (58.62%), Postives = 170/232 (73.28%), Query Frame = 3 Query: 30 TKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 725 TKY+QPF TQ +ACFWK YWS WR PQYNAIRF MT+VI + FGL++W G K K+QDL N FGAMY+ +FLG +NA +V P + +ERTV+YRE+AAGM++A+PYA++QVA +MIG+ W + KF F+Y+M F+ FTLYGMM+VALTP Q+A I LSFFLS WNLFSGFL+ R IP+WWRWYYW SPVAW LYG++T QVGD +S+V I Sbjct: 1169 TKYAQPFSTQTKACFWKMYWSNWRYPQYNAIRFLMTVVIGVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLFLGATNAATVQPAVAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALTPNYQIAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAWTLYGIITSQVGDRDSIVHI 1400
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.962e-80 Identity = 133/233 (57.08%), Postives = 170/233 (72.96%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEI 725 PT+YSQ F+TQ +ACFWKQ+WSYWRN QYNAIRF MT++I I FG+I+W+KG + +QQDL NL GA Y+ +FLG +NA +V V+ +ERTV+YRERAAGM++ +PYA AQVA +MIG++W KF F+YF++ F F++YGMM+VALTPG Q+A IV+SFFLS WNLFSGFL+ R IPVWWRWYYW SPVAW +YG+ QVGD +E+ Sbjct: 1175 PTQYSQSFITQCKACFWKQHWSYWRNSQYNAIRFFMTVIIGILFGVIFWNKGNQIHRQQDLLNLLGATYAAVMFLGATNASAVQSVVAIERTVFYRERAAGMYSELPYAFAQVAIETIYVAIQTFVYSLLLFSMIGYQWTAVKFFYFYYFIFMCFTYFSMYGMMVVALTPGYQIAAIVMSFFLSFWNLFSGFLIPRPLIPVWWRWYYWASPVAWTIYGIFASQVGDRTDELEL 1407
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.502e-74 Identity = 125/228 (54.82%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 30 TKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLES 713 T+YSQ F TQ AC WKQ+WSYWRNP Y A+RF T IA+ FG ++WD G K SK QDL N G+MY+ +FLG NA SV PV+ +ERTV+YRERAAGM++A+PYA QV+ AMIGF+W++GKF + + M+ + + FT YGMM VA+TP Q VA+IV +FF VWNLFSGF++ R +PVWWRWYYW +PVAW LYGLV Q GD+++ Sbjct: 1154 TQYSQSFWTQCVACLWKQHWSYWRNPAYTAVRFIFTTFIALIFGTMFWDLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQT 1381
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.455e-74 Identity = 125/227 (55.07%), Postives = 155/227 (68.28%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDL 707 PT+YSQ FLTQ A WKQ+WSYWRNP Y A+RF T+ IA+ FG ++WD G KT +QDL N G+MY+ +FLG NA SV PV+ VERTV+YRE+AAGM++AMPYA AQV AMIGF+W KF + +FM+ SF+ FT YGMM VA+TP +A++V S F +WNLFSGFL+ R +PVWW WYYWL PVAW LYGL+ Q GD+ Sbjct: 1141 PTQYSQSFLTQCMASLWKQHWSYWRNPPYTAVRFLFTIGIALMFGTMFWDLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDI 1367
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.243e-73 Identity = 123/227 (54.19%), Postives = 157/227 (69.16%), Query Frame = 3 Query: 30 TKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLE 710 +++SQPF TQ AC WKQ+WSYWRNP Y A+R T IA+ FG ++WD G K S+ QDL N G+MY+ +FLG N+ SV PV+ VERTV+YRE+AAGM++A+PYA AQV +MIGF+W + KF F+FM+ +F+ FT +GMM VA+TP Q VA+IV FF +VWNLFSGF+V R IP+WWRWYYW P+AW LYGLV Q GDL+ Sbjct: 1155 SEFSQPFWTQCMACLWKQHWSYWRNPAYTAVRLIFTTFIALIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQ 1381
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.406e-72 Identity = 120/232 (51.72%), Postives = 159/232 (68.53%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVE 722 PT+YS+ F+TQ AC WKQ WSYWRNP Y A+R T+VIA+ FG ++W+ G +T KQQDL N G+MY+ +++G N+ SV PV+ VERTV+YRERAAGM++A PYA QVA +MIGF+W + KF + +FM+ + + FT YGMM V LTP + +A I+ S F +VWNLFSG+L+ R IPVWWRWY W+ PVAW LYGLV Q GD++ ++E Sbjct: 1168 PTQYSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLE 1399
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 9.114e-72 Identity = 125/227 (55.07%), Postives = 150/227 (66.08%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDL 707 PTKYS FL Q AC WK + SYWRNP YNAIR T VIA+ FG I+WD G KT K QDL N G+MYS +F+G N+ SV PV+ VERTV+YRERAAGM++A PYA QVA +MIGFKW KF + +FM+ +F+ FT YGMM V LTP VA+IV S F +WNLFSGF++ R +P+WWRWY W+ PVAW LYGLV Q GD+ Sbjct: 1183 PTKYSLSFLNQCLACLWKMHLSYWRNPPYNAIRLFFTTVIALLFGTIFWDLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI 1409
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.715e-71 Identity = 123/232 (53.02%), Postives = 152/232 (65.52%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVE 722 PT+YSQ LTQ AC WKQ SYWRNP YNA+RF T VIA+ FG I+WD G K +K QDL N G+MY+ +F+G N SV PV+ VERTV+YRERAAGM++A PYA QV AMIGF+W KF + +FM + + FT YGMM V LTP +A+IV S F ++WNLFSGF++ R +P+WWRWY W PVAW LYGLV Q GD+E+ +E Sbjct: 1176 PTQYSQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME 1407
BLAST of CX290255 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.715e-71 Identity = 123/232 (53.02%), Postives = 152/232 (65.52%), Query Frame = 3 Query: 27 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVE 722 PT+YSQ LTQ AC WKQ SYWRNP YNA+RF T VIA+ FG I+WD G K +K QDL N G+MY+ +F+G N SV PV+ VERTV+YRERAAGM++A PYA QV AMIGF+W KF + +FM + + FT YGMM V LTP +A+IV S F ++WNLFSGF++ R +P+WWRWY W PVAW LYGLV Q GD+E+ +E Sbjct: 1176 PTQYSQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME 1407 The following BLAST results are available for this feature:
BLAST of CX290255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290255 ID=CX290255; Name=CX290255; organism=Citrus clementina; type=EST; length=730bpback to top |