CX290257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 399.823 bits (1026), Expect = 7.984e-111 Identity = 198/246 (80.49%), Postives = 218/246 (88.62%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLASS 738 VAD+DLSS+R+VLSGAAPLGKELE+ALR+R+PQA+LGQGYGMTEAGPVLSMCLGFAKQPF TKSGSCGTVVRNAELKV+DPETG SL +NQPGEICIRG QIMKGYLND ATA+TID EGWLHT RVKE+IK+KGFQVPPAE+E LL+SHPSIADAAVVPQKD AGEVPVAFVVRSNGF+LTEEA+KE+IA QVVFYKRLHK+YFVHAIPKSPSGKILRKDLRAKL ++ Sbjct: 312 VADFDLSSIRLVLSGAAPLGKELEEALRNRMPQAVLGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDEAATASTIDSEGWLHTGDVGYVDDDDEIFIVDRVKELIKYKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETA 557
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 379.022 bits (972), Expect = 1.458e-104 Identity = 187/245 (76.33%), Postives = 213/245 (86.94%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLAS 735 V +DLSS+R+VLSGAAPLGKELEDALR+R+PQAI GQGYGMTEAGPVLSMC FAK+P P KSGSCGTVVRNAELKV+DP+TG SL N PGEICIRGPQIMKGYLNDPEATAATIDVEGWLHT RVKE+IKFKGFQVPPAE+E+LL++HPSIADAAVVPQKD+VAGEVPVAFVVR+ ++TEE+IKE+I+ QVVFYKRLHK++F+HAIPKS SGKILR++LRAKLA+ Sbjct: 324 VERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELRAKLAA 568
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.509e-101 Identity = 186/243 (76.54%), Postives = 207/243 (85.19%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKL 729 V YDLSSVR VLSGAAPLGKEL+D+LR R+PQAILGQGYGMTEAGPVLSM LGFAK+P PTKSGSCGTVVRNAELKV+ ET SL +NQPGEICIRG QIMK YLNDPEAT+ATID EGWLHT R+KE+IKFKGFQVPPAE+E+LL++H SIADAAVVPQ DEVAGEVPVAFVVRSNG ++TEE +KEY+A QVVFYKRLHK++FV +IPKSPSGKILRKDL+AKL Sbjct: 318 VNSYDLSSVRFVLSGAAPLGKELQDSLRRRLPQAILGQGYGMTEAGPVLSMSLGFAKEPIPTKSGSCGTVVRNAELKVVHLETRLSLGYNQPGEICIRGQQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 560
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 1.845e-99 Identity = 174/246 (70.73%), Postives = 208/246 (84.55%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLASS 738 V +YDLSSVR V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DPETG+SLP N PGEICIRG QIMKGYLNDPEATA TID EGWLHT R+KE+IK+KGFQV PAE+EALLL+HP I+DAAVVP KDE AGEVPVAFVV+SNG +TE+ IK++I+ QV+FYKR+++++FV AIPK+PSGKILRKDLRA+LA++ Sbjct: 303 VDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLPRNHPGEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRARLAAA 548
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 2.409e-99 Identity = 176/245 (71.84%), Postives = 209/245 (85.31%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLAS 735 V+ YD+SSVR+++SGAAPLGKELEDALR R P+AI GQGYGMTEAGPVL+M L FAK PFP KSGSCGTVVRNA++K++D ETG SLPHNQ GEICIRGP+IMKGY+NDPE+TAATID EGWLHT RVKEIIK+KGFQV PAE+EALL++HPSIADAAVVPQK E AGEVPVAFVV+S+ E++E+ IKE++A QV+FYK++H++YFV AIPKSPSGKILRKDLR++LA+ Sbjct: 294 VSQYDVSSVRIIMSGAAPLGKELEDALRERFPKAIFGQGYGMTEAGPVLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSS--EISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAA 536
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 3.147e-99 Identity = 174/248 (70.16%), Postives = 205/248 (82.66%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLASSCP 744 V YDLSSVR V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPEAT TID EGWLHT R+KE+IK+KGFQV PAEIEALLL+HP+I+DAAVVP KDE AGEVPVAFVVRSNG +TE+ +K++I+ QV+FYKR+ +++FV +PKSPSGKILRKDLRA+LA+ P Sbjct: 299 VDSYDLSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARLAAGVP 546
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.196e-98 Identity = 175/248 (70.56%), Postives = 206/248 (83.06%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLASSCP 744 V DYDLSSVR V+SGAAPLGKELED +R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQ GEICIRG QIMKGYLNDPEATA TID EGWL+T R+KE+IK+KGFQV PAE+EALLL+HP+I+DAAVVP KDE AGEVPVAFVVRSNG +TE+ +K++I+ QV+FYKR+ +++FV AIPKSPSGKILRKDLRAKLA+ P Sbjct: 294 VDDYDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKLAAGLP 541
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.322e-97 Identity = 175/245 (71.43%), Postives = 203/245 (82.86%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLAS 735 V YDLSSVR V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+P+ KSG+CGTVVRNAE+K++DPET ASLP NQ GEICIRG QIMKGYLNDPE+T TID EGWLHT R+KEIIK+KGFQV PAE+EALLL+HP+I+DAAVVP DE AGEVPVAFVVR+NGF TEE IK++++ QVVFYKR+ +++FV AIPKSPSGKILRKDLRAK+AS Sbjct: 295 VDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRAKIAS 539
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 2.945e-97 Identity = 170/245 (69.39%), Postives = 204/245 (83.27%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLAS 735 V +YDLSSVR V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPEATA TI+ EGWLHT R+KE+IK+KGFQV PAE+EALL++HP I+DAAVVP DE AGEVPVAFVVRSNG +TE+ +K++I+ QV+FYKR+ +++FV +PKSPSGKILRKDLRA+LA+ Sbjct: 297 VHNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAA 541
BLAST of CX290257 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 2.945e-97 Identity = 170/245 (69.39%), Postives = 204/245 (83.27%), Query Frame = 1 Query: 1 VADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTXXXXXXXXXXXXXXXXRVKEIIKFKGFQVPPAEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAXQVVFYKRLHKIYFVHAIPKSPSGKILRKDLRAKLAS 735 V +YDLSSVR V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF KSG+CGTVVRNAE+K++DP+TG SLP NQPGEICIRG QIMKGYLNDPEATA TI+ EGWLHT R+KE+IK+KGFQV PAE+EALL++HP I+DAAVVP DE AGEVPVAFVVRSNG +TE+ +K++I+ QV+FYKR+ +++FV +PKSPSGKILRKDLRA+LA+ Sbjct: 297 VDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAA 541 The following BLAST results are available for this feature:
BLAST of CX290257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290257 ID=CX290257; Name=CX290257; organism=Citrus clementina; type=EST; length=746bpback to top |