CX290532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290532 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.104e-64 Identity = 124/237 (52.32%), Postives = 165/237 (69.62%), Query Frame = 1 Query: 16 RERRPPTWHSKYVTEINVAYCLLTEDGEPSTFHEALNSSDVSLWMTAMQEEIEALHKNKTWELVPLPHGRKANGNKWVYKIKRNGNN*VERYRARLAVKEYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLE*LDVKTAFLHGELEEEIYMLQPEGFAEIGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCAYKKKFEDNDFIILLLYVDDMLVVGPTK 726 R RP +Y + Y L+++D EP + E L+ + + M AMQEE+E+L KN T++LV LP G++ KWV+K+K++G+ + RY+ARL VK + QK+GIDF+EIFSP ++ A+ DL +E LDVKTAFLHG+LEEEIYM QPEGF GK+++VC+LNKSLYGLKQAPR WY +FDSF+ S Y + SD C Y K+F +N+FIILLLYVDDML+VG K Sbjct: 786 RSERPRVESRRYPS---TEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDK 1019
BLAST of CX290532 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 76/205 (37.07%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 100 PSTFHEALNSSDVSLWMTAMQEEIEALHKNKTWELVPLPHGRKANGNKWVYKIKRNGNN*VERYRARLAVKEYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLE*LDVKTAFLHGELEEEIYMLQPEGFAEIGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCAY-KKKFEDNDFIILLLYVDDMLV 711 P++F E D S W A+ E+ A N TW + P + ++WV+ +K N RY+ARL + + QK ID+ E F+P ++ ++L + +DVKTAFL+G L+EEIYM P+G + +N VC+LNK++YGLKQA RCW++ F+ + E+ S D C Y K N+ I +LLYVDD+++ Sbjct: 891 PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS-CNSDN-VCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVI 1093
BLAST of CX290532 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.170e-15 Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 52 VTEINVAYCLL---TEDGEPSTFHEALNSSDVSLWMTAMQEEIEALHKNKTWELVPLPHGRKANGNKWVYKIKRNGNN*VERYRARLAVKEYAQKEGIDFNEIFSP 360 + ++N Y L T EP + AL W AMQEE++AL +NKTW LVP P + G KWV+K K + + ++R +ARL K + Q+EGI F E +SP Sbjct: 9 INKLNPKYSLTITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSP 111 HSP 2 Score: 27.7202 bits (60), Expect = 5.170e-15 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 434 M*KLHFFMENLKKKYICSNQKVLQ 505 M K+HF M KKK+IC N VL+ Sbjct: 137 MFKMHFSMGIFKKKFICINLLVLR 160
BLAST of CX290532 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 1 Query: 430 LDVKTAFLHGELEEEIYMLQPEGFAEIGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCAYKKKFEDNDFIILLLYVDDMLVVGPT 723 +DV TAFL+ ++E IY+ QP GF + V L +YGLKQAP W + ++ + + + R +H Y + D I + +YVDD+LV P+ Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPS 97 The following BLAST results are available for this feature:
BLAST of CX290532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290532 ID=CX290532; Name=CX290532; organism=Citrus clementina; type=EST; length=733bpback to top |