CX290544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290544 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 72/164 (43.90%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 7 SFKGKQPSDDRVELSKCVVNYAGGLPLAIEVLGSFLCGRSVEEWKSSLNRLQEAPNEKVLKVLRISYDGLDKRDKEIFLDIACFFKGKDKDRVRKKLDSCVFNSVIGIRELLDKSLITIVN-NKLWMHDLLQEMGWEIVREHHSDKPGKWSRLWLYKDVYHVLS 495 +F + P+++ +LS VVNYA GLPLA++V GS L + EWKS++ ++ ++ L+ISYDGL+ + +E+FLDIACF +G++KD + + L+SC + G+R L+DKSL+ I N++ MHDL+Q+MG IV + PG+ SRLWL K+V V+S Sbjct: 361 AFGKEVPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKISYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQVQMHDLIQDMGKYIV--NFQKDPGERSRLWLAKEVEEVMS 522
BLAST of CX290544 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.794e-24 Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 7 SFKGKQPSDDRVELSKCVVNYAGGLPLAIEVLGSFLCGRSVEEWKSSLNRLQEAPNEKVLKVLRISYDGLDKRDKEIFLDIACFFKGKDKDRVRKKLDSCVFNSV-IGIRELLDKSLI-TIVNNKLWMHDLLQEMGWEIVREHHSDKPGKWSRLWLYKDVYHVLS 495 +FK PSDD L+ AG LPLA+ VLGSF+ G+ EEW+ SL L+ + +V KVL++ YDGL +K++FL IAC F G+ ++ +++ + + V G++ L DKSLI N ++ MH LL+++G E+VR+ +PGK L K+ VLS Sbjct: 357 AFKQSSPSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLDGEVEKVLKVGYDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLS 521
BLAST of CX290544 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 59/143 (41.26%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 43 ELSKCVVNYAGGLPLAIEVLGSFLCGRS-VEEWKSSLNRLQEAPNEKVLKVLRISYDGLDKRDKEIFLDIACFFKGKDKDRVRKKLDSCVFNSVIGIRELLDKSLITIVNNKLWMHDLLQEMGWEIV-REHHSDKPGKWSRLW 465 E+S V+ YA G PLA+ + G L G+ E + + +L+E P + ++ SYD L+ R+K IFLDIACFF+G++ D V + L+ C F +GI L++KSL+TI N++ MH+L+Q++G +I+ RE K + SRLW Sbjct: 321 EVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIAFLKLKECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVRMHNLIQDVGRQIINRETRQTK--RRSRLW 461
BLAST of CX290544 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 4.549e-21 Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 7 SFKGKQPSDDRVELSKCVVNYAGGLPLAIEVLGSFLCGRS-VEEWKSSLNRLQEAPNEKVLKVLRISYDGLDKRDKEIFLDIACFFKGKDKDRVRKKLDSCVFNSVIGIRELLDKSLITIVNNKLWMHDLLQEMGWEIV 420 S K + ELS V+NYA G PLAI V G L G+ + E +++ +L+ P K++ + +YD L +K IFLDIACFF+G++ + V + L+ C F + I L+DK L+TI N++W+H L Q++G EI+ Sbjct: 316 SIKEDMGEQNLQELSVRVINYANGNPLAISVYGRELKGKKKLSEMETAFLKLKRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVWLHKLTQDIGREII 454
BLAST of CX290544 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.049e-17 Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 46 LSKCVVNYAGGLPLAIEVLGSFLCGRSVEEWKSSLNRLQEAPNEKVLKVLRISYDGLDKRDKEIFLDIACFFKGKDKDRVRKKLDSCVFNSVIGIRELLDKSLITI-VNNKLWMHDLLQEMGWEIVREHHSDKPGKWSRLWLYKDVYHV 489 LS +V ++ G P ++ L S EW ++ + + S GLD ++ IFLDIACFF DKD V LD C F++ +G R L+DKSL+TI +N + M +Q G EIVR+ +D+PG SRLW + HV Sbjct: 1000 LSLELVKFSNGNPQVLQFLSSI-----DREWNKLSQEVKTTSPIYIPGIFEKSCCGLDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLSFIQATGREIVRQESADRPGDRSRLWNADYIRHV 1143 The following BLAST results are available for this feature:
BLAST of CX290544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290544 ID=CX290544; Name=CX290544; organism=Citrus clementina; type=EST; length=647bpback to top |