CX290546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290546 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 10 VLAIVHIPNLKVGTVLLSCAFMYDIFWVFVSKKLFHE--SVMIVVARG--DKSGEDGIPMLLKIPRM-FDPWG----GYSIIGFGDILLPGLIIAFSLRFKLSDLSS 303 +L + +P K T+LL F+YDIF+VF++ L S+M+ VA G D + + +PM+LK+PR+ P +S++GFGDIL+PGL++A+ RF + SS Sbjct: 336 MLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSS 442
BLAST of CX290546 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 42/107 (39.25%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 10 VLAIVHIPNLKVGTVLLSCAFMYDIFWVFVSKKLFH--ESVMIVVARG--DKSGEDGIPMLLKIPRM-FDPWG----GYSIIGFGDILLPGLIIAFSLRFKLSDLSS 303 +L + +P K T+LL F+YD+F+VF++ L ES+M+ VA G D + + +PM+LK+PR+ P +S++GFGDIL+PGL++A+ RF + SS Sbjct: 332 MLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSS 438
BLAST of CX290546 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 10 VLAIVHIPNLKVGTVLLSCAFMYDIFWVFVSKKLFHE--SVMIVVARG--DKSGEDGIPMLLKIPRM-FDPWG----GYSIIGFGDILLPGLIIAFSLRFKLSDLSS 303 +L + +P K T+LL F+YDIF+VF++ L S+M+ VA G + S + +PM+LK+PR+ P +S++GFGDIL+PGL++A+ RF + SS Sbjct: 329 MLRTIRLPTFKACTLLLLVLFVYDIFFVFITPYLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSS 435
BLAST of CX290546 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 10 VLAIVHIPNLKVGTVLLSCAFMYDIFWVFVSKKLFHE--SVMIVVARG--DKSGEDGIPMLLKIPRM-FDPWG----GYSIIGFGDILLPGLIIAFSLRFKLSDLSS 303 +L + +P K T+LL F+YDIF+VF++ L S+M+ VA G + S + +PM+LK+PR+ P +S++GFGDIL+PGL++A+ RF + SS Sbjct: 329 MLKTIRLPTFKACTLLLLVLFIYDIFFVFITPFLTKSGNSIMVEVATGPSNSSTHEKLPMVLKVPRLNTSPLSLCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSS 435 The following BLAST results are available for this feature:
BLAST of CX290546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290546 ID=CX290546; Name=CX290546; organism=Citrus clementina; type=EST; length=661bpback to top |