CX290550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUBL_ARATH (Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.374e-41 Identity = 81/107 (75.70%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 4 RSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILYPK 324 R++FFEPFI GL+NATV+QFCKSSVEPMGEESDH+HITALSDALGV IRVVYLDRSSCDSGG +VNHHDF+P E + PFITLLYRPGHYDILYPK Sbjct: 193 RADFFEPFITGLSNATVDQFCKSSVEPMGEESDHIHITALSDALGVAIRVVYLDRSSCDSGGVTVNHHDFVPV----GITNEKDEEASAPFITLLYRPGHYDILYPK 295
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUB1_RAT (Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus GN=Otub1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 1 KRSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILY 318 + S+FFE FI G TV++FC+ VEPM +ESDH+HI AL+ AL V I+V Y+DR G + N H F E + P + LLYRPGHYDILY Sbjct: 185 RESKFFEHFIEG--GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGE----GGTTNPHVF--------------PEGSEPKVYLLYRPGHYDILY 270
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUB1_MOUSE (Ubiquitin thioesterase OTUB1 OS=Mus musculus GN=Otub1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 1 KRSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILY 318 + S+FFE FI G TV++FC+ VEPM +ESDH+HI AL+ AL V I+V Y+DR G + N H F E + P + LLYRPGHYDILY Sbjct: 185 RESKFFEHFIEG--GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGE----GGTTNPHVF--------------PEGSEPKVYLLYRPGHYDILY 270
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUB1_HUMAN (Ubiquitin thioesterase OTUB1 OS=Homo sapiens GN=OTUB1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 1 KRSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILY 318 + S+FFE FI G TV++FC+ VEPM +ESDH+HI AL+ AL V I+V Y+DR G + N H F E + P + LLYRPGHYDILY Sbjct: 185 RESKFFEHFIEG--GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGE----GGTTNPHIF--------------PEGSEPKVYLLYRPGHYDILY 270
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUBL_DROME (Ubiquitin thioesterase otubain-like OS=Drosophila melanogaster GN=CG4968 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.767e-15 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 1 KRSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILYP 321 + ++F++ FI G + T+E F VEPM +ESDH+HI AL ALG +RV YLDR G +V HDF E + P I L+YRPGHYDILYP Sbjct: 175 EEADFYQNFIEG--DLTIEAFRHLEVEPMYKESDHIHIIALCTALGAGVRVEYLDRGE----GGTVKAHDF--------------PEGSEPRIYLIYRPGHYDILYP 261
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUBL_CAEEL (Ubiquitin thioesterase otubain-like OS=Caenorhabditis elegans GN=C25D7.8 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 1 KRSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILYPK 324 + SE + PFI TV Q+C+ +EPM +++DH+ I +L A G +R+ Y+DR++ +GG H+D P D + P ITLLYRPGHYD++Y K Sbjct: 183 QNSEEYAPFID--EGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGW---HYDI---PSD--------DQQIAPEITLLYRPGHYDVIYKK 274
BLAST of CX290550 vs. ExPASy Swiss-Prot
Match: OTUB2_MOUSE (Ubiquitin thioesterase OTUB2 OS=Mus musculus GN=Otub2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 40/105 (38.10%), Postives = 53/105 (50.48%), Query Frame = 1 Query: 4 RSEFFEPFILGLTNATVEQFCKSSVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGGASVNHHDFIPTPGDCPNATSGSTETTIPFITLLYRPGHYDILY 318 R++FF FI ++ FC VEPM E DHV ITALS AL + ++V Y+D ++NHH F E IP + LLY+ HY+ILY Sbjct: 146 RADFFRHFID--EEMDIKDFCTHEVEPMAMECDHVQITALSQALNIALQVEYVDEMD-----TALNHHVF--------------PEAAIPSVYLLYKTSHYNILY 229 The following BLAST results are available for this feature:
BLAST of CX290550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290550 ID=CX290550; Name=CX290550; organism=Citrus clementina; type=EST; length=650bpback to top |