CX290552

Overview
NameCX290552
Unique NameCX290552
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10356 contig Ccv1_Contig10356:1112..1759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 6.673e-81
Identity = 136/207 (65.70%), Postives = 157/207 (75.85%), Query Frame = 2
Query:    8 HKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPTR 628
            ++I A MGSPKPP  F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSETHPWHLHGHDFWVLG G+GKF+ E+E            T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IPT+
Sbjct:  328 YRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTK 534          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 3.662e-79
Identity = 134/207 (64.73%), Postives = 155/207 (74.88%), Query Frame = 2
Query:    8 HKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPTR 628
            ++I A MGSPKPP   +RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++K+ L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKFT E+E            T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IPT+
Sbjct:  358 YRITAAMGSPKPPVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTK 564          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.817e-78
Identity = 137/207 (66.18%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   11 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPTR 628
            +IFA MGSPKPP  ++RRL LLNTQN INGF KWAINNVSL LPPTPYL ++K  L  AF+QN PPE F   YD+  PP N  TT G+GVY   +  TVDVILQNAN + PN+SE HPWHLHGHDFWVLG GEGKF   EDE            T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GV  VG IP +
Sbjct:  364 RIFAAMGSPKPPVRYNRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHMVGMIPPK 570          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.178e-77
Identity = 134/205 (65.37%), Postives = 158/205 (77.07%), Query Frame = 2
Query:    8 HKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIP 622
            +KIFALMGSPKPP   HRR+ LLNTQN I+G+TKWAINNVSL LP   YLGSI+YG+ +AFD   PP+NF  +YDV+K   N+N+T G+GVYML  NTT+D+ILQNANA+  ++SE HPWHLHGHDFWVLG GEGKF+++D             TAVIFP+GWTALRFV DNPG WAFHCHIEPH H+GMGV+ A GV  V  IP
Sbjct:  356 NKIFALMGSPKPPPQNHRRIILLNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIP 559          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.742e-24
Identity = 63/158 (39.87%), Postives = 84/158 (53.16%), Query Frame = 2
Query:  116 INNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGM 577
            INNV+  +P T  L +  + +   F  + P +  SN YD   P    VNA T  G+ +Y L  N TV ++LQN   I   LS+ HP+HLHG +F+ +GRG G F  E +              V  P G WTA+RF+ADNPG W  HCH+E H   G+
Sbjct:  387 INNVTFTMPKTALLQAHFFNISGVFTDDFPAKP-SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLELHTTWGL 540          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21
Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  113 AINNVSLNLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGM 577
            ++NN++  +P T  L +  YG K  F  +    PP  F+  Y  +       T+LG+ +  +  N TV+++LQ+ N +     E+HP+HLHG++F+V+GRG G F    +              V  P G WTA+RF ADNPG W  HCH+E H   G+
Sbjct:  383 SLNNITFVMPRTALLQAHYYGQKGVFAADFPDRPPARFN--YTGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLSV---ESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLEVHTSWGL 536          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21
Identity = 55/155 (35.48%), Postives = 75/155 (48.39%), Query Frame = 2
Query:  116 INNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGM 577
            INNV+  +P TP L +  Y +   F ++ P             P N  T  G+ VY L  N +V V+LQ+   I P   E+HP HLHG +F+V+G+G G +                   +  P G WTA+RF +DNPG W  HCH E H   G+
Sbjct:  387 INNVTFIMPSTPILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISP---ESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFEVHTSWGL 538          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.324e-20
Identity = 66/208 (31.73%), Postives = 98/208 (47.12%), Query Frame = 2
Query:   17 FALMGSPKP-----PTNFHRRLTLL---------NTQNTINGFT-KWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 595
            F L G P P     PT     +T+          +TQ++ +G +   A+N VS  LP    L   ++        N  P  ++ ++     P       G+ V  L  N+TV+++LQN  A     SE HP HLHG +F+VL +G G FT  +             T  +   GW  +RFVA+NPG W FHCH++ H  +G+G+V A+
Sbjct:  343 FGLRGPPSPSAPAVPTKVDVNMTIELGLGQLPCDSTQSSCSGKSVAAAMNGVSFRLPSQMSLLEAQF--------NRTPGVYTADFPDAPQPSGTPMVEGTKVRRLKYNSTVEIVLQNPTAFP---SENHPIHLHGFNFFVLAQGLGNFTPGNVSGYNLVDPVSRNTLAVPTGGWAVIRFVANNPGMWFFHCHLDAHVPMGLGMVFAV 539          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.949e-20
Identity = 55/156 (35.26%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  113 AINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 577
            AINN++  +P T  L +  + L   +  + P +         KPP N  T   + +Y L  N+TV V+LQ+   + P   E HP HLHG +F+V+G G G + +K+D             T  +   GW A+RF ADNPG W  HCH+E H   G+
Sbjct:  380 AINNITFKMPKTALLQAHYFNLTGIYTTDFPAKPRRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLEVHTTWGL 532          
BLAST of CX290552 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.496e-19
Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  113 AINNVSLNLPPTPYLGS-IKYGLKDAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGV 583
            ++NNVS  +P T  L +  +         N P     P N++       PP N   T G+ V  L  NTTV+V+LQ+ + +    +E+HP HLHG+DF+V+G G G +   ++              +  P  GW A+RFVADNPG W  HCH++ H   G+ +
Sbjct:  360 SMNNVSFVMPRTSLLQAHYQRRYNGVLAANFPAAPRTPFNYTGT-----PPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILG---AESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNPGVWIMHCHLDVHLSWGLSM 515          
The following BLAST results are available for this feature:
BLAST of CX290552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
ASO_CUCPM6.673e-8165.70L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA3.662e-7964.73L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA1.817e-7866.18L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_TOBAC1.178e-7765.37L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC16_ARATH5.742e-2439.87Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC2_ORYSJ7.760e-2135.22Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC22_ORYSJ7.760e-2135.48Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC7_ORYSJ1.324e-2031.73Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC10_ARATH2.949e-2035.26Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC11_ORYSJ2.496e-1934.15Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC02025D10SK IF1 Citrus clementina cDNA clone C02025D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290552 ID=CX290552; Name=CX290552; organism=Citrus clementina; type=EST; length=647bp
CATTCTCCACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAA
ATTTCCACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGG
TTCACTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACCCCCCACTCC
TTACTTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATCAGAATG
GTCCCCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCTCCTGTA
AACGCTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTTAAACAC
CACAGTTGATGTTATACTTCAAAATGCAAACGCGATAAGGCCAAACTTGA
GTGAAACCCACCCTTGGCATTTGCATGGGCATGATTTTTGGGTATTAGGG
CGCGGAGAAGGGAAGTTTACGAAAGAAGATGAGAAGAAATTTAACTTGAA
GAATCCACCATTGAAAAATACTGCGGTGATATTCCCATATGGCTGGACTG
CTTTAAGATTTGTTGCTGATAATCCAGGTGCTTGGGCATTTCACTGCCAT
ATTGAGCCCCATTTCCATATTGGAATGGGTGTGGTTCTTGCTCTTGGTGT
TGAAACCGTTGGTAATATTCCAACCAGGCGTTGGCTTGTGGTTTGAC
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