CX290916

Overview
NameCX290916
Unique NameCX290916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:12..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 2.447e-50
Identity = 99/152 (65.13%), Postives = 117/152 (76.97%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S S AQL+P+FY +TCP+V  I+ D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK AAPN NSARGF VID MKAAVE AC R VSCADILTIAA+++V L+GGPSW VPLGRRDS  A  ALAN NLP P  +L +
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQ 176          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.121e-50
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S AQL+P+FY ++CPNV NI+ D++     SD  I AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF V+D +KAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDSR A   LAN NLP PS +L E
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPE 156          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.215e-49
Identity = 95/148 (64.19%), Postives = 114/148 (77.03%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            S AQL+ +FYS TCPN   I+   +++A  SD RIGASLIRLHFHDCFV+GCDASILLD T +I SEK A PN NSARGF V+DN+K A+E AC  VVSC+D+L +A+E SV+L+GGPSW V LGRRDS TAN A AN ++P P  SL
Sbjct:   28 SSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESL 175          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.586e-49
Identity = 96/152 (63.16%), Postives = 115/152 (75.66%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S S AQLSPSFY  TCP V +I+ + +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAA+EKAC R VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGPS++L +
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQ 169          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.072e-49
Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            S S AQLSPSFY  TCP V +I  + +K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+VID MKAAVEKAC + VSCAD+L IAA++SV L+GGPSW VP GRRDS      LAN NLPGPS++L
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTL 169          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 4.616e-49
Identity = 97/152 (63.82%), Postives = 115/152 (75.66%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S S AQL+P+FY ++CPNV NI+ D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQ 177          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.343e-48
Identity = 96/152 (63.16%), Postives = 115/152 (75.66%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S S AQL+P+FY  +CPNV NI+ + +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQ 177          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.754e-48
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 3
Query:  102 QLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            QL+ +FYS TCPN   I+   +++AF SD RIGASLIRLHFHDCFVDGCDASILLD + +I SEK A PN NSARGF V+DN+K A+E  C  VVSC+DIL +A+E SV+L+GGPSW V LGRRDS TAN A AN  +P P   L
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGL 145          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.291e-48
Identity = 96/151 (63.58%), Postives = 115/151 (76.16%), Query Frame = 3
Query:   87 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT-IDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            S S AQLS +FYS+TCPNV  I+  V+++A  +D RIG SLIRLHFHDCFVDGCD S+LLD+  T I SEK A PN NS RGF+V+DN+K AVE AC  VVSC DIL +A+E SV+L+GGPSW V LGRRD RTAN+  AN +LP P  +L
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENL 169          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.992e-48
Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 3
Query:   96 QAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            +AQL+ +FYS++CPN+L+ ++  +K A +S+ R+GAS++RL FHDCFV+GCD SILLD T++   E+ AAPN NSARGF VIDN+K+AVEKAC  VVSCADIL IAA  SV   GGP+W V +GRRD+RTA++A AN N+P P++SL +
Sbjct:   27 EAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQ 175          
The following BLAST results are available for this feature:
BLAST of CX290916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER32_ARATH2.447e-5065.13Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER1C_ARMRU7.121e-5064.00Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER53_ARATH1.215e-4964.19Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER38_ARATH1.586e-4963.16Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_ARMRU2.072e-4964.67Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1A_ARMRU4.616e-4963.82Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER34_ARATH1.343e-4863.16Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PERA2_ARMRU1.754e-4864.14Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER15_IPOBA2.291e-4863.58Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER52_ARATH2.992e-4859.73Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03001F12Rv OF1 Citrus clementina cDNA clone C03001F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290916 ID=CX290916; Name=CX290916; organism=Citrus clementina; type=EST; length=542bp
TAGAGAAGTAGTAACTCTTAGCCAAAATGGCTTCACTTCGTTATCTTCTT
GCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAGC
TCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
TTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAGAATCTTCCAGGACCATCTAATTCTCTTGATGAG
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