CX290922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290922 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 3.231e-27 Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 33 KVDRRSTSGYC-SFVGGNLVTWRSKKQNVVARSSAEAEFRAVAHGICEIMWIRRLLEELKATKSSPM*LYYDNKAAISIAHNPVLHDRTKHVEIDKHFIKEKIDNGLVHMEHIPTGEQVADVFTKGLHTKQFNFLVGKLAM 452 ++DR+ST+GY NL+ W +K+QN VA SS EAE+ A+ + E +W++ LL + +P+ +Y DN+ ISIA+NP H R KH++I HF +E++ N ++ +E+IPT Q+AD+FTK L +F L KL + Sbjct: 1260 EIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400
BLAST of CX290922 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.031e-17 Identity = 44/129 (34.11%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 39 DRRSTSGYCSFVGGNLVTWRSKKQNVVARSSAEAEFRAVAHGICEIMWIRRLLEELKATKSSPM*LYYDNKAAISIAHNPVLHDRTKHVEIDKHFIKEKIDNGLVHMEHIPTGEQVADVFTKGLHTKQF 425 +R+S++GY G ++W+SK Q VA S+ EAE+ A E++W++R L+EL + + +Y D+++AI ++ N + H RTKH+++ H+I+E +D+ + + I T E AD+ TK + +F Sbjct: 1189 NRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316 The following BLAST results are available for this feature:
BLAST of CX290922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290922 ID=CX290922; Name=CX290922; organism=Citrus clementina; type=EST; length=505bpback to top |