CX290923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.657e-26 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEF----GRTDTKREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTP-QYPCANGKFY 343 +VA +VT FF+GIKNQA + CEGK FYTR AF+SA+ YP F + KRE+AAFFAH THET FC++ EI+K+N YC PT Q+PCA G+ Y Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKY 165
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.064e-25 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTDFCFVEEISKTNPYC-TPTPQYPCANGKFY 343 +VA++VT FF+GIKNQA + CEGK FYTR AF+SA+++YP F T KRE+AAFFAHVTHET FC++ EI+K+N YC Q+PCA G+ Y Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKY 176
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.219e-23 Identity = 55/99 (55.56%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI-SKTNPYCTPT-PQYPCANGKFY 343 SVA +VTPEFF + QA C KGFYTRDAF++A YP FGRT D+KRE+AAFFAH HET FC++EEI + YC T Q+PC GK Y Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGY 165
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.456e-23 Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEE-ISKTNPYCTPTPQYPCANGKFY 343 +V+D+VT EF+DGI +QA A C GK FYTR F+ A+S+YP FG D KRE+AA+FAHVTHET C++EE N YC + QYPC K Y Sbjct: 45 TVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNKEY 142
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.204e-22 Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 62 NSVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI-SKTNPYC--TPTPQYPCANGKFY 343 N AD++T +F +GI +QA + C GK FYTRDAF+SAL+SY +FGR D+KRE+AA FAH THET FC++EEI + YC QYPC++ K Y Sbjct: 66 NVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGY 166
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.185e-22 Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTP-TPQYPCANGKFY 343 SV +VT FF+GI NQA C GK FYTRD+FI+A +++P F + T+RE+A FAH THET FC++EEI+ + YC QYPCA GK Y Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGY 165
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 4.627e-21 Identity = 52/99 (52.53%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTPT-PQYPCANGKFY 343 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F D+KRE+AAFFAHVTHET C++ EI+ N YC + Q+PC GK Y Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKY 181
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.043e-21 Identity = 52/99 (52.53%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTP-TPQYPCANGKFY 343 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F R D+KRE+AAFFAHVTHET C++ EI+ + YC Q+PC GK Y Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKY 184
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.758e-20 Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 62 NSVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEEISKT--NPYC--TPTPQYPCANGKFY 343 +SV+D+V+ FFDGI QA A+C GK FYTR AF+SA+ P+FG D KRE+AAFFAH++HETT+ C +EE + YC QYPCA GK Y Sbjct: 85 SSVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKY 184
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.431e-16 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 V+ +V+ FD + ++ C+ KGFYT DAF++A ++P FG T + KREVAAF A +HETT +CF +E T+ YCTP+ Q+PCA GK Y Sbjct: 80 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSY 189 The following BLAST results are available for this feature:
BLAST of CX290923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290923 ID=CX290923; Name=CX290923; organism=Citrus clementina; type=EST; length=344bpback to top |