CX290927

Overview
NameCX290927
Unique NameCX290927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:16..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22
Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  301 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPT 125          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22
Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  289 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PT
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPT 121          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  289 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PT
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPT 120          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  292 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPT 126          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20
Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  292 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPT 126          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1
Query:  307 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PT
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPT 104          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.109e-18
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  334 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPT 110          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.084e-17
Identity = 35/77 (45.45%), Postives = 56/77 (72.73%), Query Frame = 1
Query:  313 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PT
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPT 84          
BLAST of CX290927 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.714e-15
Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 1
Query:  319 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPT 540
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGAT 79          
The following BLAST results are available for this feature:
BLAST of CX290927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MPCP_PONAB4.810e-2260.00Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_MOUSE4.810e-2257.14Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT6.282e-2257.14Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_BOVIN9.071e-2155.42Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_HUMAN1.185e-2054.22Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CAEEL4.502e-2051.28Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_CHOFU1.109e-1856.52Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO6.084e-1745.45Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST9.714e-1544.59Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
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Properties
Property NameValue
Genbank descriptionC03001H03Rv OF1 Citrus clementina cDNA clone C03001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290927 ID=CX290927; Name=CX290927; organism=Citrus clementina; type=EST; length=542bp
TGCTTTGCCCGGGTTCTAACAAATTGGAAGCGAGAGACAGGAGGAGGAGA
AGAGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTA
TAATTCAATCAAGCTTTTTACTCTCAAAATCAAATTTCAAAAATTCCGAA
ATGGCCCTCACAGAATCTTATAGGAAAAACTCTCTGATACCAAGCTACCT
CTACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGG
CAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTC
GTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGC
ATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTC
ACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGAT
CCTGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAGGA
ACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTT
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