CX290978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.461e-46 Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMKIGDLKGLFGLL 295 FAPV DETPP KDL V GHLPDCLNGEFVRVGPNPKF+P AGYHWFDGDGMIHGLRIKDGKA+YVSRFV+TSR KQEE+F G+K MKIGDLKGLFGLL Sbjct: 52 FAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMKIGDLKGLFGLL 149
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.597e-45 Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMKIGDLKGLFGLL 295 F PV ETPPTKDL V GHLPDCLNGEFVRVGPNPKFAP AGYHWFDGDGMIHGLRIKDGKATYVSRFV TSR+KQEE+FG +K MKIGDLKGLFGLL Sbjct: 55 FGPVT-ETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMKIGDLKGLFGLL 151
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.861e-44 Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMKIGDLKGLFGLL 295 FAP+ DETPP KDL V G LP+CLNGEFVRVGPNPKF AGYHWFDGDGMIHG+RIKDGKATYVSR+V+TSR+KQEEFFG AK MKIGDLKG FGLL Sbjct: 52 FAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMIHGVRIKDGKATYVSRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLL 149
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.367e-43 Identity = 79/97 (81.44%), Postives = 85/97 (87.63%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMKIGDLKGLFGL 292 FAPV DETPP DL V GHLP+CLNGEFVRVGPNPKF P AGYHWFDGDGMIHG+RIKDGKATY SR+V+TSR+KQEE+F G K MKIGDLKG FGL Sbjct: 56 FAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMKIGDLKGFFGL 152
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.749e-18 Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMK-IGDLKGLFGL 292 ++PVP E+ ++L V G +PDC++G ++R G NP F P AG+H FDGDGM+H ++I +G A+Y RF +T R+ QE+ G K IG+L G G+ Sbjct: 110 YSPVP-ESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGI 206
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17 Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMK-IGDLKGLFGL 292 FAPVP+ + L V+G +P C++G +VR G NP + P AG+H+FDGDGM+H ++ +G A+Y RF T R+ QE+ G K IG+L G G+ Sbjct: 146 FAPVPEHAAD-QALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGI 242
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFG 244 FAPV DE PPT + G LP LNG ++R GPNP+F P YH FDGDGM+H ++I +GKAT SR+V+T + E+ G Sbjct: 115 FAPVLDELPPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTG 195
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.430e-17 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMK-IGDLKGLFGL 292 +APVP+++ + L V G +PDC++G ++R G NP F P +G+H FDGDGM+H ++I +G A+Y RF T R+ QE+ G K IG+L G G+ Sbjct: 117 YAPVPEQSVKSS-LSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGI 213
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.413e-17 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKA-TYVSRFVRTSRVKQEEFFGGAKAMK-IGDLKGLFGL 292 FAPV E PP +L V G +P ++G + R G NP F P AG+H FDGDGM+H LRI++G A +Y RF T+R++QE G K IG+L G G+ Sbjct: 127 FAPV-GERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGI 224
BLAST of CX290978 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.070e-17 Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 2 FAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPAAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRVKQEEFFGGAKAMK-IGDLKGLFGL 292 FAPV +E P ++L V+G LPD + G +VR G NP P G+H+FDGDGM+H ++ + G A+Y RF +T+R QE G K IG+L G G+ Sbjct: 127 FAPV-NEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGI 223 The following BLAST results are available for this feature:
BLAST of CX290978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290978 ID=CX290978; Name=CX290978; organism=Citrus clementina; type=EST; length=295bpback to top |