CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.106e-46 Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPY+DGW+IKV+ + EL LM A +YTKFCEEEDS H Sbjct: 38 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.444e-46 Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 LKYA SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE GV+V +G FGAVESVKATSDVNSP+SG+V+EVN L+ P L+NSSPY+DGW+IK++ S EL+ L+ A +YTKFCEEED+ H Sbjct: 41 LKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.464e-46 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPY+DGW+IKV+ + EL LM A +YTKFCEEED+ H Sbjct: 38 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.558e-45 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDS 380 LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V QG +FG VESVKATSD+NSP+SG+VVEVN++LS +P L+NSSPY+DGW+IKV+ S EL L+D +YTK CEEED+ Sbjct: 41 LKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.558e-45 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDS 380 LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V QG +FG VESVKATSD+NSP+SG+VVEVN++LS +P L+NSSPY+DGW+IKV+ S EL L+D +YTK CEEED+ Sbjct: 41 LKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.035e-44 Identity = 83/128 (64.84%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 3 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 ++ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE +V + SFGAVESVKATS++ SP+SG+V+EVN +L+ SP L+NSSPY+DGW+IKV+ S EL+ LM +YTKFCEEED+ H Sbjct: 39 LEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.934e-44 Identity = 82/121 (67.77%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPEVG +V + FGAVESVKATSDVNSP+SG++VEVN +L+ +P L+N SPY+DGW+IKV+ + EL LM +YTKFCEEE Sbjct: 40 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEE 160
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.710e-44 Identity = 81/128 (63.28%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 3 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 ++ LKYA+SHEWVK +G+ ATIGIT HAQDHLG+VV+VELPE +V + SFGAVESVKATS++ SP+SG+++EVN++L+ SP L+NSSPY+DGW+IKV+ S EL+ LM +YTKFCEEED+ H Sbjct: 38 LEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.071e-41 Identity = 81/123 (65.85%), Postives = 99/123 (80.49%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDS 380 LKYA SHEWVK G+ ATIGITDHAQ HLGDVV+ ELPE G V G F +VESVKATSDVNSP+SG++VEVN +LS SP L+NSSPY++GW++KV+ + EL+ LM + +YTKFCEEED+ Sbjct: 41 LKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40 Identity = 76/115 (66.09%), Postives = 96/115 (83.48%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYT 356 LKYA+SHEWVK +G+ AT+GITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATSDVNSP+SG++VEVN +LS +P L+NSSPY+DGW+IKV+ + EL LM A +YT Sbjct: 38 LKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |