CX291027

Overview
NameCX291027
Unique NameCX291027
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12834 contig Ccv1_Contig12834:40..637. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291027 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.966e-54
Identity = 98/120 (81.67%), Postives = 114/120 (95.00%), Query Frame = 2
Query:  239 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNW 598
            ER+IQKNYW+EHSA+LTVEAMMLDS+ASDLDKEERPEVLSLLPPYEGK+VLE GAGIGRFTGELA+KAG +IALDFID+VIKKNE +NGH++NVKFMCADVTSPDL  ++ S+D++FSNW
Sbjct:    8 ERDIQKNYWIEHSADLTVEAMMLDSRASDLDKEERPEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESINGHYKNVKFMCADVTSPDLKITDGSLDLIFSNW 127          
BLAST of CX291027 vs. ExPASy Swiss-Prot
Match: PEAM3_ARATH (Putative phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.796e-50
Identity = 92/120 (76.67%), Postives = 108/120 (90.00%), Query Frame = 2
Query:  239 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNW 598
            EREIQKNYW EHS  L+VEAMMLDSKASDLDKEERPE+L+ LPP EG TVLEFGAGIGRFT ELA+KAG VIA+DFI+SVIKKNE +NGH++NVKF+CADVTSP++ F  +S+D++FSNW
Sbjct:    7 EREIQKNYWKEHSVGLSVEAMMLDSKASDLDKEERPEILAFLPPIEGTTVLEFGAGIGRFTTELAQKAGQVIAVDFIESVIKKNENINGHYKNVKFLCADVTSPNMNFPNESMDLIFSNW 126          
BLAST of CX291027 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.346e-50
Identity = 94/120 (78.33%), Postives = 108/120 (90.00%), Query Frame = 2
Query:  239 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNW 598
            ERE+ K YW+EHS +LTVEAMMLDS+ASDLDK ERPEVLS+LPPYEGK+VLE GAGIGRFTGELA+KA  VIALDFI+SVIKKNE +NGH++NVKFMCADVTSP L  S +SVD++FSNW
Sbjct:   11 EREVFKKYWIEHSVDLTVEAMMLDSQASDLDKVERPEVLSMLPPYEGKSVLELGAGIGRFTGELAEKASQVIALDFIESVIKKNESINGHYKNVKFMCADVTSPSLNISPNSVDIIFSNW 130          
BLAST of CX291027 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.344e-48
Identity = 89/111 (80.18%), Postives = 103/111 (92.79%), Query Frame = 2
Query:  266 MEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKNEEVNGHFENVKFMCADVTSPDLTFSEDSVDMMFSNW 598
            MEHS++LTVEAMMLDSKASDLDKEERPEVLSL+PPYEGK+VLE GAGIGRFTGELA+KAG VIALDFI+S I+KNE VNGH++N+KFMCADVTSPDL   + S+D++FSNW
Sbjct:    1 MEHSSDLTVEAMMLDSKASDLDKEERPEVLSLIPPYEGKSVLELGAGIGRFTGELAQKAGEVIALDFIESAIQKNESVNGHYKNIKFMCADVTSPDLKIKDGSIDLIFSNW 111          
The following BLAST results are available for this feature:
BLAST of CX291027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PEAM1_ARATH5.966e-5481.67Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM3_ARATH1.796e-5076.67Putative phosphoethanolamine N-methyltransferase 3... [more]
PEAMT_SPIOL2.346e-5078.33Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
PEAM2_ARATH8.344e-4880.18Putative phosphoethanolamine N-methyltransferase 2... [more]
back to top
Properties
Property NameValue
Genbank descriptionC03003B02SK OF2 Citrus clementina cDNA clone C03003B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291027 ID=CX291027; Name=CX291027; organism=Citrus clementina; type=EST; length=598bp
TTGGGTTTGCATTTTGCATGCAGCAGAGAGGGAGAGAATACAATTATAGG
TCGAGGAGTTTCTCAAGAGCCCGAGTTGCTGTTGAGGGCTTTTAGTTTAA
GCCTTCTCTCAAAGAATCTCTCGGATCTCTATTAATTTTCTTTCACAGCT
AATTAAAATACTCTACTCCTCCCTTTGAATCCTCTTGTTCTAAGAACCTT
TGCTTGTCTCAACGATGGGTACTCAAAGTAATCATGGTGAACGTGAGATC
CAAAAGAACTACTGGATGGAACACTCGGCGAATTTAACAGTGGAGGCTAT
GATGCTCGACTCCAAAGCCTCTGATCTCGACAAAGAAGAGCGTCCTGAAG
TGCTTTCTCTACTTCCACCATATGAAGGAAAAACAGTTCTGGAATTTGGA
GCTGGAATCGGTAGATTTACCGGTGAATTAGCTAAGAAGGCTGGTCATGT
TATAGCCCTGGACTTTATTGACAGTGTCATCAAGAAGAATGAAGAAGTGA
ATGGGCATTTTGAGAATGTCAAATTCATGTGTGCAGATGTTACATCCCCA
GACCTTACTTTCTCTGAGGATTCAGTGGACATGATGTTCTCAAATTGG
back to top