CX291039

Overview
NameCX291039
Unique NameCX291039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length517
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1030 contig Ccv1_Contig1030:60..576. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291039 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 3
Query:    3 TTLSFLILALASNSLLVLGTSSVPEPLLDVHGNTVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSV 515
            T +  L+ A  S S      ++   P+LD  G+ +++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSV
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSV 172          
BLAST of CX291039 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 3.621e-21
Identity = 58/168 (34.52%), Postives = 88/168 (52.38%), Query Frame = 3
Query:   21 ILALASNSLLVLGTSSVPEPLLDVHGNTVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSV 515
            +LA A+N LL     S P P+LD+ G  + +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+V
Sbjct:   17 LLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTV 180          
BLAST of CX291039 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   72 PEPLLDVHGNTVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPS 512
            P+P++D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPS 144          
The following BLAST results are available for this feature:
BLAST of CX291039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC3.869e-2334.6821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.621e-2134.52Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA5.411e-1736.67Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC03003C05SK OF2 Citrus clementina cDNA clone C03003C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291039 ID=CX291039; Name=CX291039; organism=Citrus clementina; type=EST; length=517bp
CAACAACACTCTCTTTCCTTATCCTTGCCTTGGCCTCAAACTCTTTGTTG
GTCTTGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCCACGGAAA
CACGGTCGAATCCACCCTTAAGTACTACATAGTCTCAGCCATCTGGGGAG
CTGGCGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCG
CTGGACGTTATCCAGTTACCTTCTGATATGCAAAATGGAATCGAATTAAC
ACTGTCACCGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCA
ACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAA
CCGTTGTGGAAAGTTGATAATTATGACGCGGCATCAGGCAAATGGTTTAT
AACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTTTGCTAAATT
GGTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTATATACAAAATCGTT
CATTGTCCATCCGTTTG
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