CX291680

Overview
NameCX291680
Unique NameCX291680
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3598 contig Ccv1_Contig3598:160..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL1_ARATH (Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.366e-67
Identity = 128/172 (74.42%), Postives = 143/172 (83.14%), Query Frame = 1
Query:   43 MEVELPRLGKRAMTFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNFVNKKVHFSPRVPTDARQNHFS--SRLQP 552
            ME E+  +   AMT DE SMER+KSFVK LQELKNLRPQLYSAA+Y EKSYLHSEQKQMVLDNLKDY  +ALVNAVDHLGT A KLTDL + Q SD+STME+R SC++Q+LLTC+TY +KEGLRQQQLLA IP HHKHYILPN VNK+VHFSP   TD RQNH+   SRLQP
Sbjct:    1 METEISGMDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKEGLRQQQLLAVIPLHHKHYILPNSVNKRVHFSPLRRTDTRQNHYQAISRLQP 172          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL1_ORYSJ (Probable protein ABIL1 OS=Oryza sativa subsp. japonica GN=Os01g0622700 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.403e-58
Identity = 109/151 (72.19%), Postives = 125/151 (82.78%), Query Frame = 1
Query:   67 GKRAMTFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNFVNKKVHFSPRVPTDA 519
            G    T DE SMERSKSFVK LQELKNLRPQLYSA+EY EKSYLHSEQKQMVLDNLKDYA RALVNAVDHLGT AYKLTDL EQQ S+VST+EL+V+C+NQ++LTCQTY++KEG+RQQQ+     RHHKHYI+P   NK++     + TDA
Sbjct:   27 GPAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHKHYIVPTLANKRMQAFSEMQTDA 177          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL4_ORYSJ (Probable protein ABIL4 OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.213e-51
Identity = 101/149 (67.79%), Postives = 124/149 (83.22%), Query Frame = 1
Query:   82 TFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNFVNKKVHFSPRVPTDARQN 528
            T DE SMERSKSFVK LQELKNLRPQLYSA+EY EKSYLHSEQKQMVL+NLKDYA RA+VNAVDHLGT AYKLTDL EQQ S+VST+EL+V+ +NQ++LTCQ ++++ GLRQQ++     +HHKHYILP+  +K+   + R+ TD  Q+
Sbjct:   23 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVVNAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDRAGLRQQKIGGTTFKHHKHYILPSTGHKRTQ-AARLQTDNGQD 170          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.070e-35
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 1
Query:   76 AMTFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 468
            A  +DE SM++S  F  GLQ+LKNLR QLYSAAEY+E SY   ++KQ+V++ LKDYA +ALVN VDHLG+  YK+ D ++++  +VS  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK YILP
Sbjct:    7 ASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKALVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYILP 137          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34
Identity = 69/134 (51.49%), Postives = 95/134 (70.90%), Query Frame = 1
Query:   70 KRAMTFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPN 471
            + A  +DE SM++S  F   L++LKNLR QLYSAAEY+E SY + EQKQ+V++ LKDYA +ALVN VDHLG+  YK+ D ++++  +V+  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK Y LP+
Sbjct:   11 REASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETLKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYFLPS 144          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL2_ORYSJ (Putative protein ABIL2 OS=Oryza sativa subsp. japonica GN=Os01g0551800 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.131e-28
Identity = 59/134 (44.03%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   67 GKRAMTFDEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 468
            G  + T +E  M+ +  F   +++LK L+ QLYSAAEY+E +Y   + KQ V++NLK+Y+ +ALVN VDHLG+ ++K++ L++Q+  +V    LRVSC++Q+    Q   +KEGL QQ L+   P++HK YILP
Sbjct:   17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKEGLSQQSLVITAPKYHKRYILP 150          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL4_ARATH (Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.856e-27
Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 1
Query:   88 DEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 468
            DE  M+++  F + L++LKNLR QLYSAAEY+E SY  +E K+ V++ LK+YAA+A+VN VDHLG+ + K    L   ++  ST  LR+S + Q++  C+ Y  K G  Q  LL   PRHHK Y  P
Sbjct:   18 DELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNTVDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQYPRHHKRYFFP 144          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL3_ORYSJ (Probable protein ABIL3 OS=Oryza sativa subsp. japonica GN=Os01g0236400 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.856e-27
Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 1
Query:   88 DEDSMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP--NFVNKKVHFSPRVPTDARQNHFSSRL 546
            D  S++    F   L++L+NLR QLYSAAEY+E  Y ++ QK  V+ +LKDY   ALV+ VDHLG  +YK+ +L+++++ +V+  E RVS + Q++  CQ   ++EG  QQ LL   P++H+ YILP  + V   +H     P  +RQ H S ++
Sbjct:   26 DMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVSTVDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLIRAPKYHRRYILPGTDIVESAIHPVSEPPRYSRQ-HMSRKM 179          
BLAST of CX291680 vs. ExPASy Swiss-Prot
Match: ABIL5_ORYSJ (Probable protein ABIL5 OS=Oryza sativa subsp. japonica GN=Os01g0760900 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-13
Identity = 37/100 (37.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:   97 SMERSKSFVKGLQELKNLRPQLYSAAEYWEKSYLHSEQKQMVLDNLKDYAARALVNAVDHLGTAAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYS 396
            S+  +  F   L+ELK+LR QL+  A+  EK++L +E+K+++L++ K Y   A+V  +DHLGT + KL   L Q+  +++  E +++ + Q+LLTC+ Y+
Sbjct:   31 SLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYA 129          
The following BLAST results are available for this feature:
BLAST of CX291680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ABIL1_ARATH1.366e-6774.42Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=... [more]
ABIL1_ORYSJ4.403e-5872.19Probable protein ABIL1 OS=Oryza sativa subsp. japo... [more]
ABIL4_ORYSJ5.213e-5167.79Probable protein ABIL4 OS=Oryza sativa subsp. japo... [more]
ABIL2_ARATH3.070e-3554.20Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH1.990e-3451.49Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
ABIL2_ORYSJ2.131e-2844.03Putative protein ABIL2 OS=Oryza sativa subsp. japo... [more]
ABIL4_ARATH6.856e-2746.46Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=... [more]
ABIL3_ORYSJ6.856e-2740.65Probable protein ABIL3 OS=Oryza sativa subsp. japo... [more]
ABIL5_ORYSJ3.303e-1337.00Probable protein ABIL5 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionC04002B05SK FlavFr1 Citrus clementina cDNA clone C04002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291680 ID=CX291680; Name=CX291680; organism=Citrus clementina; type=EST; length=552bp
ACTCCCGCCACAATAAAGGGTTTTGCTTGATCGAGCTGAGAGATGGAAGT
GGAGCTACCGAGGCTGGGTAAGCGTGCCATGACTTTCGATGAGGACTCCA
TGGAGCGTAGCAAAAGCTTCGTCAAAGGTTTGCAGGAGCTCAAGAACTTA
AGACCTCAACTGTATTCAGCTGCAGAATATTGGGAAAAGTCTTATCTTCA
CAGTGAGCAGAAACAAATGGTACTTGATAACCTAAAAGACTATGCTGCAA
GAGCGCTGGTCAATGCTGTTGATCACCTTGGCACTGCGGCTTACAAGTTA
ACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCAACCATGGAGCTAAG
GGTCTCTTGTATGAACCAGAAACTTCTTACATGCCAAACCTACTCAAATA
AAGAAGGTCTCCGGCAGCAACAGTTATTGGCGTTCATCCCAAGACATCAC
AAGCATTACATTTTACCAAATTTTGTGAACAAGAAGGTACATTTTAGTCC
ACGTGTACCAACTGATGCTAGGCAAAATCATTTTTCATCACGTCTTCAAC
CT
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