CX291686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 1.416e-51 Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = -3 Query: 157 DEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDEAGPDNY 498 D+KREL+FKEDGQEYAQVLRMLGNGRCEAMCIDG KRLCHIRGKMHKKVWI AGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELP+ TRLNEGI AG +D++ ++Y Sbjct: 21 DDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIGAGGLDEEMDTANDY 134
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 3.264e-48 Identity = 89/112 (79.46%), Postives = 98/112 (87.50%), Query Frame = -3 Query: 163 DEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDEAGPD 498 D+KREL+FKEDGQEYAQV RMLGNGRCEA+C+DG KRLCHIRGKMHKKVWI AGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP+T RLNEG+ ++ E D Sbjct: 21 DDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGVDVDGPEEGEGDSD 132
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 5.963e-42 Identity = 82/107 (76.64%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 5.963e-42 Identity = 82/107 (76.64%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 5.963e-42 Identity = 82/107 (76.64%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAMC DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.017e-41 Identity = 82/112 (73.21%), Postives = 91/112 (81.25%), Query Frame = -3 Query: 160 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDEAGPDN 495 EKREL+FKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE D+ Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEVQFDD 133
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4) HSP 1 Score: 168.703 bits (426), Expect = 1.328e-41 Identity = 81/107 (75.70%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EA+C DG KRLCHIRGK+ KKVWI DIILVGLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 1.735e-41 Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 1.735e-41 Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAMC DG +RLCHIRGK+ KKVWI DIIL+GLRDYQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128
BLAST of CX291686 vs. ExPASy Swiss-Prot
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 4.725e-39 Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = -3 Query: 175 EKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGAKRLCHIRGKMHKKVWIGAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPETTRLNEGIAAGIVDDDE 495 EKREL+FKEDGQEYAQV++MLGNGR EAM DG KRL HIRGK+ KKVWI DIILVGLR+YQD+KADVILKY DEAR LKAYGELPE ++NE G DDDE Sbjct: 22 EKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDE 128 The following BLAST results are available for this feature:
BLAST of CX291686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291686 ID=CX291686; Name=CX291686; organism=Citrus clementina; type=EST; length=500bpback to top |