CX293827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 148.673 bits (374), Expect = 1.300e-35 Identity = 78/150 (52.00%), Postives = 101/150 (67.33%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQIL---RAASLDVD----KQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKD 431 +GIHW Y SHA ELTAG+YN RDGY PIA+MLARH A NFTC+EMRD EQP +A AP++LV+QV S+ K ++ +AGENALPRYD A+ Q+L R ++++ +M TYLR++ L Q DN+ F FVKKM+ D Sbjct: 300 SGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADLD 449
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 7.133e-34 Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQ-ILRAASLDVDK------QMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKD 431 +GIHW Y +HA ELTAGYYN RDGY PIA+ML+RH AI NFTC+EMRD EQP DA P++LV+QV S + + +AGENALPRYD A+ Q IL A V+ M TYLR++ L Q N+ F FV KM+ +D Sbjct: 298 SGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQD 447
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.295e-32 Identity = 74/146 (50.68%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQ-ILRAASLDVDK------QMCAFTYLRMNPHLFQPDNWRQFVAFVKKMN 419 +GIHW Y +++HA ELTAGYYN RDGY PIA+M++RH I NFTC+EMRD EQ DA AP++LV+QV S + ++ +AGENAL RYD A+ Q IL A V+K +M TYLR++ L Q N+ F FV KM+ Sbjct: 298 SGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMH 443
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.295e-32 Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQ-ILRAASLDVDK------QMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKD 431 +GIHW Y + +HA ELTAGYYN RDGY PIA++++RH AI NFTC+EMRD EQ DA +P+KLV+QV S + ++ +AGENAL RYD A+ Q IL A V+K +M TYLR++ L Q N+ F FV KM+ +D Sbjct: 298 SGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMHADQD 447
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.914e-32 Identity = 74/150 (49.33%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQ-ILRAASLDVDK------QMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKD 431 +GIHW Y +++HA ELTAGYYN RDGY PIA+M++RH A NFTC+EMRD EQ DA P++LV+QV S + ++ +AGENAL RYD A+ Q IL A V+K +M TYLR++ L Q N+ F FV KM+ +D Sbjct: 298 SGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFVVKMHADQD 447
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.327e-31 Identity = 75/158 (47.47%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAA-------SLDVDKQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKDVHRCLEQV 455 +GIHW Y +HA ELTAGYYN RDGY IA ML RH A NFTC EMRD EQ +A APE+LV+QV SA + + LA ENAL RYD A+ ILR A + + ++ FTYLR++ LFQ N+ F FV++M+ D + ++ V Sbjct: 295 SGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANLDYNPNVDPV 452
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.259e-30 Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAA-------SLDVDKQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMN 419 +GIHW Y SHA ELTAGYYN RDGY IA+ML RH A NFTC EMRD EQ A+ APE+LV+QV SA + + +A ENALPRYD A+ ILR A S + ++ FTYLR++ L + N+ F FV +M+ Sbjct: 295 SGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.148e-30 Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAA-------SLDVDKQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMN 419 +GIHW Y SHA ELTAGYYN RDGY IA+ML RH A NFTC EMRD EQ A+ APE+LV+QV SA + + +A ENALPRYD A+ ILR A S + ++ FTYLR++ L + N+ F FV +M+ Sbjct: 295 SGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.066e-29 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAASLD-------VDKQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMNEGKD 431 +GIHW Y SHA ELTAGYYN RDGY PIA+ML++H I NFTC+EM+D + +AL AP++LV++V S K + +AGENAL Y + QIL A + +M FTYLR++ +FQ +N+ F V+KM+ +D Sbjct: 300 SGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHADQD 449
BLAST of CX293827 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.392e-29 Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 3 AGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQKAHVPLAGENALPRYDEYAHEQILRAA-------SLDVDKQMCAFTYLRMNPHLFQPDNWRQFVAFVKKMN 419 +GIHW Y +HA ELTAGYYN RDGY IA+ML RH A NFTC EMRD EQ ++A APE+LV+QV SA + + +A ENAL RYD A+ ILR A + + ++ FTYLR++ L + N+ F FV+KM+ Sbjct: 295 SGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKMH 440 The following BLAST results are available for this feature:
BLAST of CX293827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293827 ID=CX293827; Name=CX293827; organism=Citrus clementina; type=EST; length=485bpback to top |