CX293828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293828 vs. ExPASy Swiss-Prot
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.506e-27 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 2 Query: 2 AQAPPLVAVVDNQLYAVEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNELLVVGGQRGPEGENVVLNSWCPKSGVNNGTLDWKVLAEKQHVGVFVYNCAVLGC 343 A+APPLVAVV+NQLYA ++ V+KYDK W +GRLP RA NGWGLAF+ACG L+V+GG + G + LNSW P G G W +L +++H FVYNCAV+GC Sbjct: 358 AEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCSGGGFIELNSWIPSDG---GPPQWTLL-DRKHSPTFVYNCAVMGC 467
BLAST of CX293828 vs. ExPASy Swiss-Prot
Match: FBK29_ARATH (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.382e-27 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 2 Query: 2 AQAPPLVAVVDNQLYAVEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNELLVVGGQRGPEGENVVLNSWCPKSGVNNGTLDWKVLAEKQHVGVFVYNCAVLGC 343 ++APPLVAVV ++LYA Y VKKYDK N W+ +G LP RA NGWG+AF+ACG++L+VVGG R G + +N+ P G L W+VLA K G FVYNCAV+GC Sbjct: 342 SEAPPLVAVVKDELYAANYAQQEVKKYDKRLNVWNKVGNLPERASSMNGWGMAFRACGDQLVVVGGPRAIGGGFIEINACVPSEGTQ---LHWRVLASKPS-GNFVYNCAVMGC 451
BLAST of CX293828 vs. ExPASy Swiss-Prot
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana GN=At1g26930 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.409e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 2 Query: 2 AQAPPLVAVVDNQLYAVEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNELLVVGGQRGPEGENVVLNSWCPKSGVNNGTLDWKVLAEKQHVGVFVYNCAVLGC 343 A APPLVAVV++QLYA ++ V++YDK K W+ +G LP +A NGWGLAF+ACG+ ++V+GG + P + LNSW P + T +W +L +KQ V FVYNCAV+ C Sbjct: 313 AMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAGSMNGWGLAFRACGDRIIVIGGPKAPGEGFIELNSWVP----SVTTPEWHLLGKKQSVN-FVYNCAVMSC 421
BLAST of CX293828 vs. ExPASy Swiss-Prot
Match: FBK70_ARATH (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 5 QAPPLVAVVDNQLYAVEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNELLVVGGQRGP-EGENVVLNSWCPKSGVNNGTLDWKVLAEKQHVGV----FVYNCAVL 337 Q+PPL+AVV + LY++E N ++ YD N+W LG +PVRA + GWG+AFK+ G++LLV+G GP E + + + P + N L W+ K+ GV F+ NC V+ Sbjct: 308 QSPPLIAVVGDDLYSLETSANELRVYDANANSWKKLGDVPVRAKSNGGWGVAFKSLGDKLLVIGASAGPSRAETMSVYTSRPSANPAN-KLYWE--ESKRCCGVRFNHFILNCCVM 420 The following BLAST results are available for this feature:
BLAST of CX293828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293828 ID=CX293828; Name=CX293828; organism=Citrus clementina; type=EST; length=579bpback to top |