CX293835

Overview
NameCX293835
Unique NameCX293835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10397 contig Ccv1_Contig10397:6..519. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.742e-48
Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDIA 511
            MAE  VKLLG+W SPF+ RV+WALK+KGV YEY+EE+  NKS LLL+ NPVYKK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+DPY+RA ARFWAKF D+K V  V+  F  +GEEQEK   +  E LK+L+  L+ K FF GDK GF DIA
Sbjct:    1 MAE--VKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIA 153          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.490e-46
Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEK-AAKARENLKMLERALEGKPFFGGDKIGFLDIA 511
            MAE  VKLLG+W SPF+ RV+WALK+KGV YEY+EE+  NKS LLL+ NP++KK+PVL+HNGK + ES++I+EYIDE ++   +LP+DPY+RA ARFWAKF D+K VP V+  F  +GEEQEK   +  E LK+L+  L+ K FF GDK GF DIA
Sbjct:    1 MAE--VKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDK-VPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIA 153          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 9.464e-46
Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDIA 511
            MAE  VKLLG+W SPF  RV+WALKLKGV YEY+EE+  NKS LLL+ NPV+KK+PVL+HNGKP+ ES++I+EYIDE ++   +LP+DPY+RA ARFW+KF  +K V  V+  F  +GEEQEK   +  E LK+L+  L+ K FF GDK GF DIA
Sbjct:    1 MAE--VKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIA 153          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.697e-45
Identity = 90/155 (58.06%), Postives = 114/155 (73.55%), Query Frame = 2
Query:   53 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEV-MGAFASQGEEQEK-AAKARENLKMLERALEGKPFFGGDKIGFLDIA 511
            +E VKLLG   SPF  RV+ ALKLKGV Y+++EENL NKS LLL+YNPV+KK+PV VHN +P+AESL+I+EYIDE WK NP+LP DPY+RA ARFW+KF D+K V  V    F    +E+EK   +  E L+ LE  L+ K FFGG++ G +DIA
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIA 159          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.331e-44
Identity = 92/156 (58.97%), Postives = 114/156 (73.08%), Query Frame = 2
Query:   47 MAE-ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKC--VPEVMGAFASQGEEQEKAAKARENLKMLERALEGKPFFGGDKIGFLD 505
            MAE E VKLLG WASPF+ RV+ ALKLKG+ YEYVEE L NKSPLLL  NP++KK+PVLVHNGK + ES +I+EYIDE W QNP+LP+DPYER+ ARF+AK  DE+   V  +  A A +   +  A + RE +  LE+ L GK +FGG  +GFLD
Sbjct:    1 MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLD 156          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 91/155 (58.71%), Postives = 119/155 (76.77%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKA-AKARENLKMLERALEGKPFFGGDKIGFLDI 508
            MAE  VKLLG   SPF+ RV+WALK+KGV YE++EE+L NKSPLLL+ NP++KKIPVL+HNGK + ES++I+EYIDEA++   +LP+DPY+RA ARFWAK+ ++K    V  +F S+GEEQEKA  +A E LK+L+   + K  F GDK GF DI
Sbjct:    1 MAE--VKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGA-AVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADI 152          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP--LLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAV 514
            MA E V LL +W S F +R++ AL  K + YEY EE+L NKSPLLL+ NP++KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP DPY+RA ARFWA + D+K        + ++GEEQE A K   E LK+LE AL  KP+FGG+  GF+DIA+
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIAL 159          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.291e-42
Identity = 85/159 (53.46%), Postives = 113/159 (71.07%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN--PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAV 514
            MA E V LL +W S F +R++ AL  K + YEY +E+L NKSPLLL+ NP++KKIPVL+HNGKP+ ES++ +EYI+E WK     LLP DPY+RA ARFWA + D+K        +A++GEEQE A K   E LK+LE AL  +P+FGG+  GF+DIA+
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIAL 159          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.564e-40
Identity = 83/158 (52.53%), Postives = 108/158 (68.35%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAKA-RENLKMLERALEGKPFFGGDKIGFLDIAV 514
            M   +V LL +W S F +R++ AL LKG+ YE  EENL +KSPLLL  NPV+KKIP+L+HN K + ESL I+EYIDE W    PLLP DPYER+ ARFWA + D+K        ++ +GE+QE+A K   E LK LE  L  K +FGGD +GF+D+A+
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVAL 158          
BLAST of CX293835 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.549e-40
Identity = 82/158 (51.90%), Postives = 108/158 (68.35%), Query Frame = 2
Query:   47 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASQGEEQEKAAKA-RENLKMLERALEGKPFFGGDKIGFLDIAV 514
            M   +V LL +  S F +R++ AL LKG+ YE  EENL +KSPLLL  NPV+KKIP+L+HNGKP+ ESL I+EYIDE W +  PLLP DPY+R+ ARFWA + D K        ++ +GE+QE+A K   E  K LE  L  K +FGGD +GF+D+A+
Sbjct:    1 MESNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVAL 158          
The following BLAST results are available for this feature:
BLAST of CX293835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTX2_TOBAC7.742e-4860.90Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.490e-4659.62Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC9.464e-4659.62Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN4.697e-4558.06Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH2.331e-4458.97Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU7.499e-4358.71Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX4_TOBAC4.860e-4254.09Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC8.291e-4253.46Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTXA_TOBAC1.564e-4052.53Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL4.549e-4051.90Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionC05001D02SK FlavSen1 Citrus clementina cDNA clone C05001D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293835 ID=CX293835; Name=CX293835; organism=Citrus clementina; type=EST; length=514bp
ATTCATTTAGATATTATCACGCGCTGCTTTTGCTTGGCGAGCAATAATGG
CTGAAGAAAGTGTGAAGTTGCTGGGTTACTGGGCAAGCCCCTTTGCTCTT
AGAGTTAAGTGGGCGCTCAAACTGAAGGGAGTTCACTACGAATATGTTGA
AGAGAATCTCCCCAACAAGAGTCCCTTGCTGTTGCGATACAATCCGGTTT
ATAAGAAGATTCCAGTTCTTGTACACAATGGGAAACCATTGGCAGAATCA
CTACTGATCATCGAATACATTGATGAAGCGTGGAAACAAAATCCTCTCCT
CCCAGAAGATCCTTACGAACGGGCCAATGCACGTTTCTGGGCAAAATTCT
TTGATGAGAAGTGTGTACCTGAAGTCATGGGAGCATTTGCCTCACAAGGG
GAGGAACAAGAGAAAGCTGCAAAAGCTCGAGAGAATCTGAAGATGCTGGA
AAGGGCTCTGGAGGGGAAGCCCTTTTTTGGTGGTGACAAGATAGGCTTTC
TGGACATTGCTGTG
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