CX293839

Overview
NameCX293839
Unique NameCX293839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2034 contig Ccv1_Contig2034:3..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34
Identity = 73/170 (42.94%), Postives = 107/170 (62.94%), Query Frame = 3
Query:   78 AAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVC-YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 584
            +A  ++L GKV                LF ++GA+VV+AD+QD+LG  L  +LG D   Y+HCD++NE +V   VD AV++FGKLD+M+NNAG+       + +  K D ER++ VN +G FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +
Sbjct:    9 SADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTE 178          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.113e-31
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 3
Query:   90 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDIMYNNAGIL---DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 584
            KRL+GKV              V LF ++GA+VVIAD+ D  GE LA  LG  V ++ CD+S ED+V   VD A+S+  G+LD+  NNAG+L    R+  SIL    ++ +R++ VN +G  LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K
Sbjct:   51 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTK 219          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.727e-27
Identity = 69/178 (38.76%), Postives = 98/178 (55.06%), Query Frame = 3
Query:   75 SAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            S+ P +RL GKV              V LFH++GAKV I D+QD LG ++   L      +   +IH D+  ED++ N VD AV  FG LDI+ NNAG+       I +   S+ E   +VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + ++
Sbjct:   11 SSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVA 188          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.559e-17
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            V+ F    A VV+AD+ +  GE +  K   D + ++H DI++E    N + +AV KFG LD++ NNAGI       I +   S+  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L + ++
Sbjct:   22 VQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMA 167          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17
Identity = 53/169 (31.36%), Postives = 91/169 (53.85%), Query Frame = 3
Query:   96 LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            LEGKV               +LF ENG KVVIA++ ++ G   E++  + G DV ++  D+++E+ V N+V   V  +G +D++ NNA ++  S  SI + P  + ER+I VN  G ++ +++ A  M+ +  G I+  AS     +   +  Y+ SK G++ L   L+
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVM--SVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLA 168          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 3
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL 572
            V+ F    A VV+AD+ +  GE +  K   D + ++  DI+NE    N + +AV KFG LD++ NNAGI       I +   SD  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L
Sbjct:   22 VQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVL 160          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.825e-16
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   93 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 584
            RL GKV              V      GAKVV  D+ D+ G+ +A +L     Y+H D++   +    VDTAV+ FG L ++ NNAGIL  + G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK 165          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.825e-16
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   93 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 584
            RL GKV              V      GAKVV  D+ D+ G+ +A +L     Y+H D++   +    VDTAV+ FG L ++ NNAGIL  + G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK 165          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15
Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  153 VELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            V+ F    A VV+AD+ +  GE +  K   D + ++  DI++E    + V++AV  FG LD++ NNAGI       I +   SD  +++ VN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L K ++
Sbjct:   22 VQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMA 167          
BLAST of CX293839 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 3
Query:   99 EGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGED---LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLS 593
            +GKV                +F E GAKV I D+ ++ G++   L   +G +  +I  D++ + E I  V   V  FG+LDI+ NNAGI+   +G+I +T + D ++ + VN  G FL +K+A   M  Q  G I+  +S    I       Y++SK  +LGL + L+
Sbjct:    4 QGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQI--VKKTVETFGRLDILVNNAGIVP--YGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLA 167          
The following BLAST results are available for this feature:
BLAST of CX293839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MOMAS_ORYSJ3.008e-3442.94Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE3.113e-3144.38Sex determination protein tasselseed-2 OS=Zea mays... [more]
ABA2_ARATH2.727e-2738.76Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
BACC2_BACSU2.559e-1736.49Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y019_THEMA4.364e-1731.36Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
BACC_BACAM1.270e-1638.30Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_MYCTU4.825e-1632.323-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO4.825e-1632.323-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
BACC_BACSU4.085e-1535.81Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y325_THEMA1.188e-1432.14Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]

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Properties
Property NameValue
Genbank descriptionC05001D06SK FlavSen1 Citrus clementina cDNA clone C05001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293839 ID=CX293839; Name=CX293839; organism=Citrus clementina; type=EST; length=593bp
AGTTTCTTGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTT
GAAGAAAAGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGA
AGGCAAAGTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGG
CGGTTGAACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTC
CAGGATAAGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTG
CTACATCCATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTG
ATACCGCCGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCA
GGAATTCTTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGA
TCTAGAACGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCA
AGCATGCTGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTT
ACAGCTAGTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATAC
AATATCCAAATATGGGATTTTAGGACTAGTAAAGTGCTTGTCA
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