CX293865

Overview
NameCX293865
Unique NameCX293865
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9833 contig Ccv1_Contig9833:41..495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC2_CANLI (Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 5.859e-61
Identity = 116/151 (76.82%), Postives = 131/151 (86.75%), Query Frame = 1
Query:    4 MAKKIEG-FNFEQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            MAK+I G F F+QRHGK RVRVARVW++K+G +F+VEW V ISLLSD + +YV DDNSDIVATDT+KNTVYAKAKEC E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWE VSVDGQ HEHGFKLGSERHT E  VQ+SG LQ+TSG
Sbjct:    1 MAKEIVGGFKFDQRHGKERVRVARVWKTKKGGYFIVEWRVGISLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSG 151          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC1_SOYBN (Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 2.908e-60
Identity = 108/146 (73.97%), Postives = 128/146 (87.67%), Query Frame = 1
Query:   16 IEGFNFEQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            +EGF FEQRHGK RVRVARVW++++G+HF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LS EEFAILLAKHF SFY++VT AIV IVEKPWE V+VDGQ HEHGFKLGSE+HTTE  VQ+SG+LQ+TSG
Sbjct:    7 VEGFKFEQRHGKERVRVARVWKTRQGQHFIVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEEFAILLAKHFVSFYQKVTGAIVNIVEKPWERVTVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSG 152          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC2_SOYBN (Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.105e-59
Identity = 107/146 (73.29%), Postives = 127/146 (86.99%), Query Frame = 1
Query:   16 IEGFNFEQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            +EGF FEQRHGK RVRVARVW++++G+HF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LS E+FAILLAKHF SFY++VT AIV IVEKPWE V VDGQ HEHGFKLGSE+HTTE  VQ+SG+LQ+TSG
Sbjct:    7 VEGFKFEQRHGKERVRVARVWKTRQGQHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSG 152          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC1_CANLI (Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.105e-59
Identity = 114/151 (75.50%), Postives = 130/151 (86.09%), Query Frame = 1
Query:    4 MAKKIEG-FNFEQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            MAK+I G F F+QRHGK RV+VARVW++K+G +F+VEW V  SLLSD + +YV DDNSDIVATDT+KNTVYAKAKEC E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWE VSVDGQ HEHGFKLGSERHT E  VQ+SG LQ+TSG
Sbjct:    1 MAKEIVGGFKFDQRHGKERVQVARVWKTKQGWYFIVEWRVGNSLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSG 151          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_PHAVU (Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 1.443e-59
Identity = 108/146 (73.97%), Postives = 126/146 (86.30%), Query Frame = 1
Query:   16 IEGFNFEQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            +EGF FEQRHGK RVRVARVWR+ +GRHF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LSVE+FAILLAKHF SFY++VT AIV IVEKPWE V VDGQ H+HGF LGSE+HTTE  VQ+SG+LQ+TSG
Sbjct:    6 VEGFKFEQRHGKERVRVARVWRTPQGRHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSVEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHQHGFTLGSEKHTTEAIVQKSGSLQLTSG 151          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_ARATH (Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.183e-53
Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 1
Query:    4 MAKKIEGFNFEQRHGKARVRVARVWR-SKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            MA++ +G   +QRHGKARVRV RVWR + +G H  VEWNVSISLLS  + +Y  DDNSDIVATDTIKNTVY KAKEC ++LSVEEFAIL+ KHF SFY QV +AIV I+EKPWE VS+DG+ H HGFKLGSE HTTE  V++SG L +TSG
Sbjct:    1 MAQEADGIRLDQRHGKARVRVGRVWRHAHDGSHHFVEWNVSISLLSHCLSSYRLDDNSDIVATDTIKNTVYVKAKECGDRLSVEEFAILIGKHFCSFYPQVFTAIVNIIEKPWERVSIDGKPHLHGFKLGSENHTTEARVEKSGALNLTSG 151          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_DICDI (Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.279e-15
Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   34 EQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSII-AYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSV-DGQLHEHGFKLGSERHTTEVTVQESGTLQMTSG 453
            + R+GKARVRV RV++     H + +++  + L        Y+  DNS +VATDT+KNTVY  A++ +E  S+EE+ ILL KHF + Y  V    V + E  W  +   +G+   H F+   E H+  VT     +  + SG
Sbjct:    6 DNRYGKARVRVLRVFKGPNEYHKVFDFDCRVLLRGAEFSETYLTGDNSKVVATDTMKNTVYVIAQK-EEFKSLEEYGILLGKHFLATYSWVNGVEVVMRENQWRRIKTSNGKEQAHSFQRDREIHSVTVTSSRDKSPVVVSG 146          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_PICJA (Uricase OS=Pichia jadinii PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.197e-13
Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = 1
Query:   43 HGKARVRVARVWRSKEG--RHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTS 450
            +GK  V+  +V +  +   +  ++E  V+  L      +Y + DNS IV TDT+KNT+   AK   E   +E FA  LA HF   Y  V+   V+IV+  W   +VDG+ H+H F   G E+  T++  + SG  +++S
Sbjct:   10 YGKDNVKFLKVKKDPQNPKKQEVMEATVTCLLEGGFDTSYTEADNSSIVPTDTVKNTILVLAKTT-EIWPIERFAAKLATHFVEKYSHVSGVSVKIVQDRWVKYAVDGKPHDHSFIHEGGEKRITDLYYKRSGDYKLSS 147          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_RABIT (Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13
Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 1
Query:   10 KKIEGFNFEQR-HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSG 453
            KK E   F +  +GK  V+V  + R  +  H + E   S+ L   S   YV  DNSDI+ TDTIKNTV+  AK  K   S+E FA+ + +HF S +  V    V + E PW+ +  +G  H H F    +  H  EV  + SG   + SG
Sbjct:    5 KKNEDVEFVRTGYGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKQDYVYGDNSDIIPTDTIKNTVHVLAK-FKGIKSIEVFAMNICEHFLSSFNHVVRVHVYVEEVPWKRLEKNGVQHVHAFIHTPTGTHFCEVEQRRSGLPVIHSG 152          
BLAST of CX293865 vs. ExPASy Swiss-Prot
Match: URIC_ASPFL (Uricase OS=Aspergillus flavus GN=uaZ PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 5.941e-13
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   40 RHGKARVRVARVWRS-KEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTS 450
            R+GK  VRV +V +  K G   + E  V + L  +   +Y   DNS IVATD+IKNT+Y  AK+       E F  +L  HF   Y  + +A V IV   W  + +DG+ H H F +   E+   +V V E   + + S
Sbjct:    8 RYGKDNVRVYKVHKDEKTGVQTVYEMTVCVLLEGEIETSYTKADNSVIVATDSIKNTIYITAKQ-NPVTPPELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDIDGKPHPHSFIRDSEEKRNVQVDVVEGKGIDIKS 145          
The following BLAST results are available for this feature:
BLAST of CX293865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
URIC2_CANLI5.859e-6176.82Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1[more]
URIC1_SOYBN2.908e-6073.97Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2[more]
URIC2_SOYBN1.105e-5973.29Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1[more]
URIC1_CANLI1.105e-5975.50Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1[more]
URIC_PHAVU1.443e-5973.97Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2[more]
URIC_ARATH1.183e-5368.21Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 ... [more]
URIC_DICDI1.279e-1535.92Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV... [more]
URIC_PICJA1.197e-1333.81Uricase OS=Pichia jadinii PE=3 SV=1[more]
URIC_RABIT4.549e-1336.67Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1[more]
URIC_ASPFL5.941e-1335.25Uricase OS=Aspergillus flavus GN=uaZ PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC05001G11SK FlavSen1 Citrus clementina cDNA clone C05001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293865 ID=CX293865; Name=CX293865; organism=Citrus clementina; type=EST; length=455bp
AAAATGGCGAAAAAAATAGAGGGATTCAATTTCGAGCAGCGACACGGGAA
AGCTCGAGTGAGAGTTGCAAGAGTTTGGCGAAGCAAAGAAGGCCGCCATT
TTATGGTCGAATGGAACGTCAGCATCAGCTTGCTCTCCGATTCCATCATC
GCCTACGTTGACGACGATAACTCCGATATCGTCGCCACCGATACCATAAA
AAATACTGTTTACGCTAAAGCTAAGGAATGTAAAGAGCAACTTTCAGTCG
AGGAATTTGCTATTTTACTCGCCAAGCACTTTACGTCCTTTTATCGCCAG
GTTACTAGTGCCATAGTGAGGATAGTGGAAAAGCCATGGGAATGTGTATC
CGTGGATGGGCAACTGCATGAGCATGGTTTCAAACTTGGATCTGAGAGGC
ACACAACAGAGGTTACAGTACAGGAGTCTGGTACTTTGCAGATGACTTCT
GGCAT
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