CX293874

Overview
NameCX293874
Unique NameCX293874
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length438
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9901 contig Ccv1_Contig9901:151..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.002e-20
Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 237
            EI +LARFAV+EHNKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:   18 EIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 9.937e-20
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 252
            E+ +LARFAVDEHNKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF P + + + T+
Sbjct:   51 EVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 6.441e-19
Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 1
Query:    7 IVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 237
            +V+LARFAV EHNKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF PV  S
Sbjct:   61 LVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.197e-18
Identity = 45/75 (60.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 228
            EI  LARFAVDEHNKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF PV
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.616e-17
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 1
Query:   16 LARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSST 249
            LARFAVDEHNK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   66 LARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.028e-16
Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 219
            EI +LARFA+ EHNK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   49 EIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.665e-16
Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSS 246
            ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF PV +  S+
Sbjct:   55 QLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 3.308e-15
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query:    1 QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 237
            +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.369e-15
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 231
            E + LARFAV EHN K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF P A
Sbjct:   32 ETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of CX293874 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.777e-14
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    4 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 252
            E  + ARFAV E+NK Q + L+F            GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   59 EAEDAARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
The following BLAST results are available for this feature:
BLAST of CX293874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN2.002e-2060.26Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH9.937e-2053.01Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT1_ORYSJ6.441e-1959.74Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYTA_HELAN3.197e-1860.00Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT12_ORYSJ4.616e-1751.28Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT3_ARATH1.028e-1656.94Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_MAIZE6.665e-1648.15Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT7_ARATH3.308e-1545.57Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYT1_HORVU7.369e-1550.00Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT3_ORYSJ4.777e-1444.58Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionC05001H10SK FlavSen1 Citrus clementina cDNA clone C05001H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293874 ID=CX293874; Name=CX293874; organism=Citrus clementina; type=EST; length=438bp
CAGGAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAA
GCAGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAG
TGGTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGT
CAGAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATT
CAAGGAGTTGAAAGAATTCAATCCTGTTGCTCAGTCTCACTCCTCAACCG
CTTAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGAT
CAAACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAA
TATAAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTG
CAAGTTATGTGTCGATTATTTATGGTAGTAGCTGCAAC
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