CX293914
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 5.187e-21 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 + VTPEEREAIERLE MGFDRA+VLEVFFACNKNEELAANYLLDHMHEFED Sbjct: 327 VTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.971e-20 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 IQVT EEREAIERLEAMGF+RA+VLEVFFACNKNEELAANYLLDHMHEFE+ Sbjct: 369 IQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 9.156e-18 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 I VTPEE EAI RLEAMGFDRA+VL+VFFACNK+E+LAANYLLDHM+EF+D Sbjct: 338 IAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16 Identity = 37/51 (72.55%), Postives = 46/51 (90.20%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 + VTPEE+E+IERLEAMGFDRAIV+E F +C++NEELAANYLL+H +FED Sbjct: 318 VNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 1.616e-14 Identity = 36/51 (70.59%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 I VTP E+EAI+RLEAMGFDRA+V+E F AC++NEELAANYLL++ +FED Sbjct: 321 INVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of CX293914 vs. ExPASy Swiss-Prot
Match: RHP23_SCHPO (UV excision repair protein rhp23 OS=Schizosaccharomyces pombe GN=rhp23 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.401e-12 Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 1 IQVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 153 IQ+T EE E+I+RL +GFDR IV++ + AC+KNEELAANYL +H HE ED Sbjct: 316 IQITQEESESIDRLCQLGFDRNIVIQAYLACDKNEELAANYLFEHGHESED 366 The following BLAST results are available for this feature:
BLAST of CX293914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293914 ID=CX293914; Name=CX293914; organism=Citrus clementina; type=EST; length=533bpback to top |