CX293921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293921 vs. ExPASy Swiss-Prot
Match: LSM3_MOUSE (U6 snRNA-associated Sm-like protein LSm3 OS=Mus musculus GN=Lsm3 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 3.038e-28 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1 Query: 115 YVKLRSDRELRGKLHAYDQHLNMILGDVEEVATTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLR 327 YVK+R+DRELRG+LHAYDQHLNMILGDVEE TT+EID+ETYEEI ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 30 YVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of CX293921 vs. ExPASy Swiss-Prot
Match: LSM3_HUMAN (U6 snRNA-associated Sm-like protein LSm3 OS=Homo sapiens GN=LSM3 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 3.038e-28 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1 Query: 115 YVKLRSDRELRGKLHAYDQHLNMILGDVEEVATTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLR 327 YVK+R+DRELRG+LHAYDQHLNMILGDVEE TT+EID+ETYEEI ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 30 YVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of CX293921 vs. ExPASy Swiss-Prot
Match: LSM3_BOVIN (U6 snRNA-associated Sm-like protein LSm3 OS=Bos taurus GN=LSM3 PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 3.038e-28 Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 1 Query: 115 YVKLRSDRELRGKLHAYDQHLNMILGDVEEVATTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLR 327 YVK+R+DRELRG+LHAYDQHLNMILGDVEE TT+EID+ETYEEI ++T+R +P LFVRGDGV+LV+PPLR Sbjct: 30 YVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLR 100
BLAST of CX293921 vs. ExPASy Swiss-Prot
Match: LSM3_DICDI (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Dictyostelium discoideum GN=lsm3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.475e-24 Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 115 YVKLRSDRELRGKLHAYDQHLNMILGDVEEVATTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 333 +VK+R DRELRGKLHAYDQHLNMIL DVEE VE D+ET EEI+R +R + LFVRGDGVIL+SPPLRT+ Sbjct: 25 FVKMRQDRELRGKLHAYDQHLNMILSDVEETIKVVEKDEETDEEIIRNIKRNIKMLFVRGDGVILISPPLRTS 97
BLAST of CX293921 vs. ExPASy Swiss-Prot
Match: LSM3_SCHPO (Probable U6 snRNA-associated Sm-like protein LSm3 OS=Schizosaccharomyces pombe GN=lsm3 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.151e-17 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 115 YVKLRSDRELRGKLHAYDQHLNMILGDVEEVATTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPP 321 YVKLR DREL G+LHAYD+HLNM+LGD EE+ T + ++ ++ ++T R+ LFVRGD VIL++PP Sbjct: 23 YVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVRGDSVILIAPP 91 The following BLAST results are available for this feature:
BLAST of CX293921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293921 ID=CX293921; Name=CX293921; organism=Citrus clementina; type=EST; length=385bpback to top |