CX293945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20 Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGL 504 YHSS +D + TK G LLPL+S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ Sbjct: 4 YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGI 100
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 1.132e-19 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGL 504 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGI 100
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 1.132e-19 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGL 504 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGI 100
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.083e-17 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 202 MVYHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRL 450 MVYHS F DE + G P+LPLK+ KGPAP D + DI+DEA+ F+AN+ FRNF+++ + D++LIYLT YI L ++ Sbjct: 1 MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNFEVQGNGDRVLIYLTLYITKCLLKI 84
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe GN=arc3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACGCPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEG 456 YHSSF+ V +LPLK+ +GPA +D+ + DI+DE I FRAN FFRNF+IK AD+ LIY T +I+ L R+ G Sbjct: 4 YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNG 86
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_CAEEL (Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.922e-15 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACGCPL--LPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGL 504 YHS F E V + LP++++ KGPAP ++QD DI+DEA+T+F+ N+FFR F+IK AD+ +IYL FYI L++L+ G K + L L Sbjct: 4 YHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTNQD--DIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALAL 102
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_YEAST (Actin-related protein 2/3 complex subunit 3 OS=Saccharomyces cerevisiae GN=ARC18 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.068e-13 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 208 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGL 504 YHS+F + + G LLPL + +GPA S+ D DI+DE + FRAN FF+NF+IKS AD++LIY +IN L L+ + E K + N+ L Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSDY-DIIDECLDLFRANSFFKNFEIKSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVAL 102
BLAST of CX293945 vs. ExPASy Swiss-Prot
Match: ARPC3_ENTHI (Probable actin-related protein 2/3 complex subunit 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.605e-11 Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 196 REMVYHSSFVDEEGVTKACGCPLLPLKSHIK-GPAPASDQDRTDIVDEAITFFRANVFFRNFDIK-SSADKLLIYLTFYINVALKRLEGR 459 R YHS +D++ V KA PL+ K+ +K P D DIVDEAIT+++ANVF++N D+ ADKLL YL FY+ L GR Sbjct: 5 RSGAYHSE-LDKDIVQKAGNFPLMQFKTKVKVNPKFLLKGDDMDIVDEAITYYKANVFYKNLDMSICEADKLLAYLMFYLQSLLLTFTGR 93 The following BLAST results are available for this feature:
BLAST of CX293945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293945 ID=CX293945; Name=CX293945; organism=Citrus clementina; type=EST; length=506bpback to top |