CX293952

Overview
NameCX293952
Unique NameCX293952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length480
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX293952 vs. ExPASy Swiss-Prot
Match: FACR2_ARATH (Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11
Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:   30 SNTLGLMQIMNEEEKKKFGFDMGSIDWKHYITNVHVPGLMRNVMK 164
            SNT  LM+ M+E+EK++FGFD+GSI+W  YITNVH+PGL R+V+K
Sbjct:  569 SNTQRLMENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVLK 613
The following BLAST results are available for this feature:
BLAST of CX293952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FACR2_ARATH2.873e-1164.44Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionC05004A05SK FlavRip1 Citrus clementina cDNA clone C05004A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293952 ID=CX293952; Name=CX293952; organism=Citrus clementina; type=EST; length=480bp
TTCGGCACGAGGCGGCACGAGGGCATTGCAGCAACACACTGGGGCTAATG
CAGATCATGAATGAAGAAGAGAAGAAAAAGTTTGGATTTGACATGGGGAG
CATTGACTGGAAGCATTACATTACAAATGTTCACGTACCTGGCTTAATGA
GGAATGTCATGAAGGAAAAGAGAGGGGAGACATTGGTGGGAGCTGGGAAT
AAAATTCCAGGGGGGCCAAAATTTTATAAAAGTAAACTTTAAGGAGTAAA
GGTTAAAAAAGTGTATTTAATTATTGGGTTAAACTGCTAAATTATTAAAC
TTACGGGGCCATATTAAAAAAATAAAACTATGTTCTCAGAGCTGAATTTA
TTAGCTCCGCCCCTGATGGGAGATGTCTAGTAGCTGCTGTTTAATGACCA
TGTGAATCATGTTTAGTCATGTTACTACTTTACATTAATATTTTGATTTT
AATAATAAATCGATATTATAAAACAAAAAA
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