CX293997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.047e-42 Identity = 79/137 (57.66%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 84 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGK 494 A+ +FI++SC TTYPA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S E+ ++ AKG DF + MSNVETWVSAALTDE TC DGF GK Sbjct: 20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGK 156 HSP 2 Score: 26.5646 bits (57), Expect = 1.047e-42 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 491 QGLGGKVKSSVRAQVV 538 +G+ GK+K SVRAQVV Sbjct: 156 KGMDGKIKESVRAQVV 171
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.836e-14 Identity = 42/127 (33.07%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 111 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGF 485 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K NL RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGF 193
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.836e-14 Identity = 42/127 (33.07%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 111 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGF 485 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K NL RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGF 193
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 3 Query: 111 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFG 488 +++ C +T YP+ C S+S+ S P L +L V++ S F +KLR R +AI C GD +DRL+ S+ L + +SNVETW+SAALTD++TC D G Sbjct: 77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA--SVSNVETWLSAALTDQDTCLDAVG 197
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11 Identity = 39/126 (30.95%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 111 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGF 485 +RSSC ST YP LC+ ++ S + + +++++++ + V KL +K + L RE A+ DCL+ + +T+D L ++V++L H+ K + H +++T +S+A+T++ TC DGF Sbjct: 59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HLYPTK-KTLREHAGDLKTLISSAITNQETCLDGF 182
BLAST of CX293997 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.175e-11 Identity = 39/137 (28.47%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 78 VTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGF 485 +T ++S C ST YP LC +++A S +++ +L+++ + V KL K + L RE A+ DCL+ + +T+D L +V++L+ K + H +++T +S+A+T++ TC DGF Sbjct: 51 ITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQ--YPKQKSLRKHADDLKTLISSAITNQGTCLDGF 185 The following BLAST results are available for this feature:
BLAST of CX293997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293997 ID=CX293997; Name=CX293997; organism=Citrus clementina; type=EST; length=562bpback to top |