CX294030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 5.434e-62 Identity = 108/127 (85.04%), Postives = 116/127 (91.34%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 381 IFWKNLAPV EGGGEPP SLGWAIDT+FGSLEAL+QKM+AEGAAL GSGWVWL LD E K+L VETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWKYAS+VY+KE P Sbjct: 102 IFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 228
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 7.096e-62 Identity = 106/127 (83.46%), Postives = 116/127 (91.34%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 381 IFWKNLAPV EGGGEPP SLGWAIDT+FGSLEAL+QKM+AEGAAL GSGWVWLG+D E KRL +ETTANQDPLV+K LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYA++VY+KECP Sbjct: 102 IFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 4.600e-61 Identity = 108/127 (85.04%), Postives = 112/127 (88.19%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 381 IFWKNLAPV EGGGE PH SLGWAID FGSLE LIQ M+AEGAAL GSGWVWL LD E K+L VETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYAS+VY KECP Sbjct: 105 IFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAKECP 231
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum GN=SODA PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.283e-60 Identity = 105/127 (82.68%), Postives = 114/127 (89.76%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 381 +FWKNLAP EGGGEPP SLG AIDT+FGSLEA+IQKM+AEGAAL GSGWVWLGLD E KRL +ETTANQDPLV K P LVPLLGIDVWEHAYYLQYKNVKPDYLKNIW V+NWKYA++VY+KECP Sbjct: 102 VFWKNLAPTREGGGEPPKGSLGSAIDTNFGSLEAVIQKMNAEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKGPNLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEKECP 228
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_ARATH (Superoxide dismutase [Mn], mitochondrial OS=Arabidopsis thaliana GN=SODA PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56 Identity = 98/125 (78.40%), Postives = 111/125 (88.80%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 375 IFWKNLAP EGGGEPP SLG AID HFGSLE L++KMSAEGAA+ GSGWVWLGLD E K+L V+TTANQDPLVTK +LVPL+GIDVWEHAYYLQYKNV+P+YLKN+W V+NWKYAS+VY+KE Sbjct: 105 IFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKE 229
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_MAIZE (Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays GN=SODA.4 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 9.925e-56 Identity = 96/123 (78.05%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 IFWKNL P+ EGGGEPPH LGWAID FGS EAL++KM+AEGAAL GSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 109 IFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 231
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_ORYSJ (Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp. japonica GN=SODA PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55 Identity = 96/123 (78.05%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 IFW NL P+ EGGG+PPH+ LGWAID FGS EAL++KMSAEGAAL GSGWVWL LD E K+L VETTANQDPLVTK LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 105 IFWNNLKPISEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYE 227
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM4_MAIZE (Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55 Identity = 96/123 (78.05%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 IFWKNL P+ EGGGEPPH LGWAID FGS EAL+++M+AEGAAL GSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 107 IFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.211e-55 Identity = 95/123 (77.24%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 IFWKNL P+ EGGGEPPH LGWAID FGS EAL+++M+AEGAAL GSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 107 IFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM2_MAIZE (Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays GN=SODA.1 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 6.021e-53 Identity = 94/123 (76.42%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 IFW+NL P+ EGG EPPH LGWAID FGS EAL+++M+AEGAAL GSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 107 IFWENLKPISEGG-EPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 228 The following BLAST results are available for this feature:
BLAST of CX294030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294030 ID=CX294030; Name=CX294030; organism=Citrus clementina; type=EST; length=570bpback to top |