CX294050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.056e-29 Identity = 55/67 (82.09%), Postives = 62/67 (92.54%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEATT 203 RAKFKFP RQKIIVSRKWGFTKF+R DY++WKS+NRI+PDGVNAKLLGCHGPLA RQPG+AF+ A T Sbjct: 154 RAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINACT 220
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.344e-28 Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFP RQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLGCHG LA RQPGRAFLEA Sbjct: 83 RAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.998e-28 Identity = 58/66 (87.88%), Postives = 62/66 (93.94%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 200 RAKFKFPGRQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLG HGPLA RQPGRAFL ++ Sbjct: 154 RAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.680e-26 Identity = 51/64 (79.69%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLE 194 RAKFKFPGR+KIIV+RKWGFTK++RADYL+WK+ENRIVPDGVN KLLGC GPL+ R+PG+AFL+ Sbjct: 154 RAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRGPLSNRKPGQAFLK 217
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.680e-26 Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFPGRQKIIVSRKWGFTK +RADY R KSENRI+PDGVNAKLLGCHG LA R+PGRAF++A Sbjct: 154 RAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDA 218
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.422e-25 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFPGRQKIIVSRKWGFTKF+RADY + + E RIVPDGVNAK L CHGPLA RQPG AFL A Sbjct: 154 RAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.057e-25 Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFPGRQKIIVSRKWGFTKF+RAD+ + + E R+VPDGVNAK L CHGPLA RQPG AFL A Sbjct: 154 RAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 218
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.053e-24 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 154 RAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.053e-24 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 154 RAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218
BLAST of CX294050 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 3 RAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 197 RAKFKFP RQKII SRKWGFTKFSRADYL++KSE RIVPDGVNAKLL HG L +R PG+AFL+A Sbjct: 154 RAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHGRLEKRAPGKAFLDA 218 The following BLAST results are available for this feature:
BLAST of CX294050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294050 ID=CX294050; Name=CX294050; organism=Citrus clementina; type=EST; length=382bpback to top |