CX294052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.649e-26 Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEATT 189 KFP RQKIIVSRKWGFTKF+R DY++WKS+NRI+PDGVNAKLLGCHGPLA RQPG+AF+ A T Sbjct: 158 KFPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINACT 220
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.798e-26 Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFP RQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLGCHG LA RQPGRAFLEA Sbjct: 87 KFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 186 KFPGRQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLG HGPLA RQPGRAFL ++ Sbjct: 158 KFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.439e-24 Identity = 47/60 (78.33%), Postives = 57/60 (95.00%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLE 180 KFPGR+KIIV+RKWGFTK++RADYL+WK+ENRIVPDGVN KLLGC GPL+ R+PG+AFL+ Sbjct: 158 KFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRGPLSNRKPGQAFLK 217
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.439e-24 Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFPGRQKIIVSRKWGFTK +RADY R KSENRI+PDGVNAKLLGCHG LA R+PGRAF++A Sbjct: 158 KFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDA 218
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.911e-23 Identity = 49/61 (80.33%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFPGRQKIIVSRKWGFTKF+RADY + + E RIVPDGVNAK L CHGPLA RQPG AFL A Sbjct: 158 KFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.445e-22 Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFPGRQKIIVSRKWGFTKF+RAD+ + + E R+VPDGVNAK L CHGPLA RQPG AFL A Sbjct: 158 KFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 218
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.203e-22 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 158 KFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.203e-22 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 158 KFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.597e-21 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 183 KFP RQKII SRKWGFTKFSRADYL++KSE RIVPDGVNAKLL HG L +R PG+AFL+A Sbjct: 158 KFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHGRLEKRAPGKAFLDA 218 The following BLAST results are available for this feature:
BLAST of CX294052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294052 ID=CX294052; Name=CX294052; organism=Citrus clementina; type=EST; length=366bpback to top |