CX294108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.047e-38 Identity = 75/137 (54.74%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 138 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGP 539 CG+ CG + G++G++I+R MF D+L HRN+ CP +GFYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT ETTGGW AP G YAWGYCY+R+ P + YC PC +YYGRGP Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGP 179
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.672e-36 Identity = 71/118 (60.17%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 192 GELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 G+L IISR F+D+L HRND CPARGFYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT ETTGGW AP G Y+WGYC+ +Q P+S+YC PC YYGRGP Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCF-KQEQNPSSNYCSPSAEWPCASGKSYYGRGP 185
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36 Identity = 70/118 (59.32%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 192 GELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 G+L IIS F+D+L HRND CPARGFYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT ETTGGW AP G Y+WGYC+ +Q PASDYC PC +YYGRGP Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCF-KQEQNPASDYCEPSATWPCASGKRYYGRGP 200
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.865e-36 Identity = 75/136 (55.15%), Postives = 88/136 (64.71%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGP 539 CG G C + G +L +ISR F+ +L HRND CPA+GFYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT ETTGGW AP G YAWGYC++R+ R S YC PC QYYGRGP Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRE--RNPSTYCSATPQFPCAPGQQYYGRGP 189
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.354e-36 Identity = 69/115 (60.00%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 204 KIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY---RYCPCPLPGQYYGRGP 539 KIISR MF+ +L HRN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT ETTGGWP AP G YAWGYC++++ P+S+YC RY PC YYGRGP Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKE-RNPSSNYCAPSPRY-PCAPGKSYYGRGP 116
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.354e-36 Identity = 76/138 (55.07%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 CG G C + G T GG+LG IIS MF+ +L HRND C +GFY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSP-GDYCTPSGQWPCAPGRKYFGRGP 189
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.084e-35 Identity = 74/128 (57.81%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 159 GERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYRYCPCPLPGQYYGRGP 539 G D G D G L II + F+ LL RND RCPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ETTGGWPDAP G YAWGYCY+++++ +P D Y C QY GRGP Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNY-QCVAGKQYCGRGP 202
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.084e-35 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 3 Query: 189 GGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 GG+LG IIS MF+ +L HRND C +GFY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSP-GDYCTPSGQWPCAPGRKYFGRGP 194
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.416e-35 Identity = 77/146 (52.74%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGP 539 CG G C + +G G +DG +G I+ R++FE LL HRND CPARGFYTY+AF+ AA AFPAFG +GN RKRE+AAF QT ETTGGWP AP G ++WGYC+ +Q P SDYC PC +YYGRGP Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCF-KQEQNPPSDYCQPSPEWPCAPGRKYYGRGP 203
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.849e-35 Identity = 76/141 (53.90%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 138 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGP 539 CGS G C + G +L +ISR F+ +L HRND CPA+GFYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT ETTGGW AP G YAWGYC++R+ R S YC PC QYYGRGP Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRE--RNPSAYCSATPQFPCAPGQQYYGRGP 188 The following BLAST results are available for this feature:
BLAST of CX294108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294108 ID=CX294108; Name=CX294108; organism=Citrus clementina; type=EST; length=560bpback to top |