CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 7.245e-41
Identity = 78/98 (79.59%), Postives = 85/98 (86.73%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPSNG 294
            RGVS+TFG D VT FLQKHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGA+MSVD+TLMCSFQILKPS+KK K  +GS   A P  G
Sbjct:  218 RGVSYTFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKLLYGSGALAGPGRG 315          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 9.462e-41
Identity = 78/109 (71.56%), Postives = 89/109 (81.65%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPSNGGNVFGSTTTAK 327
            RGVSFTFG D V  FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +    + +P+ GG   G+T   K
Sbjct:  221 RGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQGMNSGRPAVGGGRPGTTAGKK 329          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 9.462e-41
Identity = 78/109 (71.56%), Postives = 89/109 (81.65%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPSNGGNVFGSTTTAK 327
            RGVSFTFG D V  FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +    + +P+ GG   G+T   K
Sbjct:  221 RGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQGMNSGRPAVGGGRPGTTAGKK 329          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_XENLA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus laevis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_RAT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_RABIT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_PONAB (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Pongo abelii GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_PIG (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Sus scrofa GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_MOUSE (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 2.108e-40
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKP 285
            RGVSFTFGAD V+ FL +HDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKPS+KK+K+ +G   + +P
Sbjct:  220 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP 314          
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PP12_ACECL7.245e-4179.59Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
GLC7A_CAEEL9.462e-4171.56Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR9.462e-4171.56Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP1B_XENTR2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_XENLA2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RAT2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RABIT2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PONAB2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PIG2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_MOUSE2.108e-4078.95Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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