CX294326

Overview
NameCX294326
Unique NameCX294326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_CHLTE (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobium tepidum GN=CT0342 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13
Identity = 38/95 (40.00%), Postives = 51/95 (53.68%), Query Frame = 3
Query:  309 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGL 593
            L  K CVPC+     PMA +  +  +  +  W LV+++G  KL R    K F   L+    V  +AEAEGHHP L L  W  V +  WTHA+GG+
Sbjct:    4 LENKHCVPCEGT-AAPMASEELQRQLSSLPEWTLVDDSGTSKLVRVFTFKDFQSALDFTNRVGQLAEAEGHHPAL-LTEWGKVTVSWWTHAIGGI 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_CHLP8 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_1693 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.185e-12
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 3
Query:  309 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGL 593
            L  K CVPC+  +  PMA +  +  +  +  W++V+++G  KL R    K F   L+    V  +AE+EGHHP L L  W  V +  WTHA+GG+
Sbjct:    4 LEKKHCVPCEGTEA-PMAPEELQRQLSHIPDWNVVDDSGTPKLVRVFTFKDFNDALDFTVRVGQLAESEGHHPAL-LTEWGKVTVSWWTHAIGGI 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_PELLD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Pelodictyon luteolum (strain DSM 273) GN=Plut_0106 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 35/96 (36.46%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  306 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGL 593
            +L   KCV C ++ L P+AE  ++ L+ ++  W +V+E+G+ +L R+   ++F + +     V ++AE+E HHP L +  W  V++E WTHAV GL
Sbjct:    3 ELNKTKCVSC-SEGLPPLAERESEELLKEIPEWVIVSEDGVSRLVRTFTFENFREAMAFAGSVGELAESEQHHPKL-VTEWGKVRVEWWTHAVHGL 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_CHLL2 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=Clim_1125 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 3
Query:  306 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGL 593
            +L    CVPC      P+A D    L  ++  W++V E G+++L R+     F + L     V ++AEAEGHHP L +  W  V +E WTH+ GGL
Sbjct:    3 ELKHMACVPCAEAG-SPLAADEIDRLRQELPDWEVVTEEGMVRLRRTFTFPDFGQALAFTNRVGELAEAEGHHPRL-VTEWGRVTVEWWTHSAGGL 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_METCA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Methylococcus capsulatus GN=MCA0497 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  309 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGLTE 599
            LT K+C PC    + P+  + A+ L+  V  W+L  ++   KL R+ + ++F + L+  + V ++ EAEGHHPD+  +GW   ++E  TH + GL E
Sbjct:    6 LTAKQCTPCQG-GIPPLTAEEAEKLLVHVPRWEL--KDAATKLKRTFRFENFMEALDFARKVGELCEAEGHHPDIG-IGWGYCRVEFQTHKINGLHE 98          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_RUBXD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_2043 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.711e-11
Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  306 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGLTE 599
            +L  K+CVPC    + P+  +  + L  ++ GW++V+E+    L RS + ++F + L+    V ++AE + HHPD+   GW   +I ++TH + GLTE
Sbjct:    3 ELAEKECVPCKG-GVPPLKGEELERLARQLPGWEVVDEH---HLRRSFRFRNFREALDFVNRVGELAEEQNHHPDI-CFGWGRAEITVFTHKIDGLTE 95          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_ALKMQ (Putative pterin-4-alpha-carbinolamine dehydratase OS=Alkaliphilus metalliredigens (strain QYMF) GN=Amet_4266 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 3
Query:  306 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGLTE 599
            +L  KKC+PC      P++ D  K  + ++   W ++N++    L R  K K+F + L    ++  +AE EGHHPD+ L+ W  V+I ++TH + GL+E
Sbjct:    3 NLAEKKCIPCSL-GTPPLSSDEIKRYISQLHEEWKVINDH---HLEREFKFKNFKEALSYTNVIGQLAEKEGHHPDM-LLSWGKVKITLFTHKIDGLSE 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_RICFE (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rickettsia felis GN=RF_0997 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  309 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGLTE 599
            L+ KKC+PC+   + P+ +     L+ ++     VNE G   L +  K  +F K +E    + ++AE E HHPDL  + W    +EIWTH + GLTE
Sbjct:    4 LSEKKCIPCEG-GIPPLEKKEIDKLLVQLQSKWQVNELG--HLYKKYKFPNFVKAMEFANKITEIAEQEAHHPDL-TISWGACSVEIWTHKIDGLTE 96          
BLAST of CX294326 vs. ExPASy Swiss-Prot
Match: PHS_NITMU (Putative pterin-4-alpha-carbinolamine dehydratase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=Nmul_A0712 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 34/106 (32.08%), Postives = 59/106 (55.66%), Query Frame = 3
Query:  297 TGQDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEIWTHAVGGLTEMTSTC 614
            T  DL TK+C PC+   + P++++    LM ++ GW+ + +     + +    K++ + +     VA ++  E HHPD+  VG+N  Q+E  THA+GGL+E    C
Sbjct:    4 TIDDLATKQCKPCEGA-MPPLSQEEITQLMRQLDGWNYLGKT----IRKEFSFKNYYQTMAFVNAVAWISHREDHHPDI-TVGYNKCQVEYTTHAIGGLSENDFIC 103          
The following BLAST results are available for this feature:
BLAST of CX294326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PHS_CHLTE4.073e-1340.00Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_CHLP81.185e-1237.89Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_PELLD2.021e-1236.46Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_CHLL22.021e-1237.50Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_METCA1.003e-1135.05Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RUBXD1.711e-1133.67Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_ALKMQ4.979e-1134.34Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RICFE6.503e-1136.08Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_NITMU6.503e-1132.08Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
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Properties
Property NameValue
Genbank descriptionC05015C02SK FlavSen1 Citrus clementina cDNA clone C05015C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294326 ID=CX294326; Name=CX294326; organism=Citrus clementina; type=EST; length=616bp
GCTGCAGGCAATTCGGCACGAGGATTCGGCGGAGAAAGCAATAACTAGCC
AGTGAGCAGACACGTTCGTGCCGTGACGCCAACTTCGTAAGCAATTATCT
ACATATTGATCCAATGAACCGGTTGTTTCATCCTCATCTCCTTTCTCTCT
CTAGGCCTCAGGTACCTCTACGATCAGTATTTGAAAGCCTGTTTGCTCGT
AATGGACGCTCCAATATTCGAGTGACTGAGATATTTCAGAATCGTGTGGG
ATTGTTTCTATCTAGGAACTCACTGTATGGGTTTAGAACCTTTTGCACTG
GCCAAGATTTGACGACTAAAAAGTGTGTGCCATGCGACACAAAGGACTTA
CGTCCCATGGCCGAAGATAGTGCTAAGCACTTAATGCCCAAGGTGGTAGG
GTGGGATTTGGTGAATGAAAATGGTATCTTGAAGCTGAACCGATCCTTGA
AAGTGAAGAGTTTCACCAAAGGTTTGGAGTTATTTAAGCTTGTAGCAGAT
GTTGCTGAAGCAGAAGGTCATCATCCAGACCTTCATCTTGTTGGATGGAA
CAATGTACAAATTGAGATATGGACGCATGCAGTTGGTGGACTGACTGAAA
TGACTTCTACTTGCTG
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