CX294359

Overview
NameCX294359
Unique NameCX294359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig872 contig Ccv1_Contig872:37..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 2.984e-55
Identity = 107/152 (70.39%), Postives = 124/152 (81.58%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSL+PS FGGRRTNV  P SL VWDPF  FL+  +TNAP  A + +   NA +DW ETP+A VFKAD+PGL KEE+ VEV+ G ILQISGERS E EEK+D WHRVERSSGKF+RRFRLP+NAKVE+VKASMENGVL+VTVPK +E KPEV+
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVK 150          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 2.526e-54
Identity = 110/153 (71.90%), Postives = 125/153 (81.70%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLS-SAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIPSIFGGRRTNV  P SL V+DPF  FL+ S + NAP  A + +   NA +DW ETP+A VFKADLPGL KEE+ VEV+ G ILQISGERS E EEKNDKWHRVERSSGKF RRFRLP+NAK+E++KASMENGVL+VTVPK  EKKPEV+
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVK 151          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.764e-53
Identity = 106/154 (68.83%), Postives = 125/154 (81.17%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFL--SSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIPSIFGGRR+NV  P S  +WDPF  F   SSA+ NA S+A + +   NA +DW ETP+A VFKADLPGL KEE+ VEV+   +LQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP+NAK+E+VKA+MENGVLTV VPK  EKKP+V+
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVK 153          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.386e-52
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MS+IPS FGGRR+NV  P SL VWDPF  F     ++A     ET+   N  IDW ETPQA VFKADLPGL KEE+ VE++ G++LQISGER+KE+EEKNDKWHRVERSSGKFLRRFRLP+NAKV++VKA+M NGV+TVTVPK E KKPEV+ +
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAI 153          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.532e-51
Identity = 103/153 (67.32%), Postives = 122/153 (79.74%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWF-LSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MS+IPS FG RR+NVL P SL +WDPF  + L ++   +     ET+  AN  IDW ETPQA VFKADLPGL KEE+ VEV+ G++LQISGER+KE+EEKN+KWHRVE SSGKFLRRFRLP+NA V++VKA MENGVLTVTVPK E KKPEV+
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVK 153          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.459e-51
Identity = 99/154 (64.29%), Postives = 122/154 (79.22%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIPS FGGRR+NV  P SL VWDPF  F  +    + S   E S   +  +DW ETP+A VFKADLPG+ KEE+ VE++  R+LQISGERS E+E+KND+WHR+ERSSGKF+RRFRLP+NAK++QVKA+MENGVLTVTVPK+E KKPEV+ +
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTI 154          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.297e-50
Identity = 102/159 (64.15%), Postives = 124/159 (77.99%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWF-----LSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIP+ FGGRR NV  P SL VWDPF  F     LSSA  + P  + E S   +  +DW ETP+A VFKAD+PGL KEE+ V+++  ++LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAKVEQVKASMENGVLTVTVPK+E KKP+V+ +
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSA--SFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAI 157          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.694e-50
Identity = 101/155 (65.16%), Postives = 123/155 (79.35%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSS-ATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIPSIFGGRR+NV  P SL VWDPF  F      + P+S + E S   N  +DW ETP+A VF+AD+PGL KEE+ V+++  R+LQISGER+ E+E+KND WHRVERSSG F+RRFRLP+NAKVEQVKASMENGVLTVTVPK+E KKP+V+ +
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDF------HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAI 149          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.873e-49
Identity = 99/154 (64.29%), Postives = 122/154 (79.22%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIPS FGGRR++V  P SL VWDPF  F   +  +A +SA  ++ V     DW ETP+A VFKAD+PGL KEE+ +E+  GR+LQISGER+ E+E+KND WHRVERSSGK +RRFRLP+NAKV+QVKASMENGVLTVTVPK+E KKP+V+ +
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRV-----DWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAI 149          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.447e-49
Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIPS F GRR+NV  P SL VWDP   F  S  + + S   E     +  +DW ETP+A VFKADLPGL KEE+ VEV+  R+LQISGERS E+E+KND+WHRVERSSGKFLRRFRLP+NAK+++VKASMENGVLTVTVPK+E KK EV+
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVK 152          
The following BLAST results are available for this feature:
BLAST of CX294359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
HSP17_ARATH2.984e-5570.3917.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH2.526e-5471.9017.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS181_ARATH4.764e-5368.8318.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_DAUCA1.386e-5267.5317.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_DAUCA1.532e-5167.3218.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_MEDSA4.459e-5164.2918.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP16_SOYBN1.297e-5064.1518.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN1.694e-5065.1617.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN1.873e-4964.2917.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA2.447e-4965.7918.1 kDa class I heat shock protein OS=Pisum sativ... [more]

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Properties
Property NameValue
Genbank descriptionC05015F10SK FlavSen1 Citrus clementina cDNA clone C05015F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294359 ID=CX294359; Name=CX294359; organism=Citrus clementina; type=EST; length=584bp
GAAGTTGTTGAGCATTTAATTACCGTGCCCACTTTGCCATAATGTCACTC
ATTCCAAGCATCTTCGGTGGCCGAAGAACCAACGTGCTCTATCCAGTTTC
ATTATATGTATGGGATCCTTTCCACTGGTTCTTGTCCTCGGCCGTTACCA
ACGCGCCGTCTTCTGCTACGGAAACATCCCATGTCGCCAATGCTTGAATT
GACTGGATAGAGACTCCTCAGGCTCGCGTATTCAAAGCTGATCTTCCAGG
GCTGATGAAAGAAGAATTATACGTTGAGGTTGATTAGGGCAGGATTCTGC
AAATAAGCGGAGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGG
CATCGCGTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCC
CGACAATGCTAAGGTGGAACAGGTTAAGGCCAGCATGGAGAATGGTGTGC
TCACAGTCACCGTTCCTAAACAGGAGGAGAAGAAACCTGAAGTAAGGCTA
TTGAGATCTCTGGCTAGTGATACTGTAATGTTTTCAGATAGTGTCTTTGT
TGCTATAATTTGTACGAAGCAAGCCCTGGTGTTG
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