CX294375

Overview
NameCX294375
Unique NameCX294375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length504
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294375 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-15
Identity = 40/53 (75.47%), Postives = 42/53 (79.25%), Query Frame = 1
Query:   19 SLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQ 177
            SLDQISPLTFSIGNTMKR          FHTP+QPVNALGAAIAI GTF+YSQ
Sbjct:  333 SLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQ 385          
BLAST of CX294375 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 40/53 (75.47%), Postives = 42/53 (79.25%), Query Frame = 1
Query:   19 SLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQ 177
            SLDQISPLTFS+GNTMKR          F TPVQPVNALGAAIAILGTF+YSQ
Sbjct:  333 SLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQ 385          
The following BLAST results are available for this feature:
BLAST of CX294375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH2.885e-1575.47Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH8.395e-1575.47Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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Properties
Property NameValue
Genbank descriptionC05015H11SK FlavSen1 Citrus clementina cDNA clone C05015H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294375 ID=CX294375; Name=CX294375; organism=Citrus clementina; type=EST; length=504bp
TGGGCTGCAGGTACATGGTCTCTCGATCAAATTTCTCCATTGACATTCAG
CATTGGCAACACAATGAAGCGAATCTCTGTCATAGTCTCCTCCATCATCA
TCTTCCACACGCCAGTTCAACCCGTCAATGCTCTTGGAGCCGCCATTGCA
ATACTCGGCACCTTCATCTATTCACAGGTATATTCTCATATCTTTCTAGT
CAAGTATGAAAAATTCAAAATTGTTGTTCACATTTTCCCTGGGGACCAAA
TGGTTTACAATTGGCAGAAAATTTTTCCTCCTTTTGGCTTTGTACTGCCC
ACTTGGTTGTATGGAGACAAAAGACCTGCAGAACAGCCTTTCAATCTTCT
TTAGGGCCATTTACCAGTAGGGGTTAAAAAAAAAAAAAAAAAAATCCAAT
TTGAGGATAATTTGCCCCTTCCTCTGAATGTATTTTTTGGTCCAAGATTT
GGAAATTTATGTGACTAAATCAAACCCCAGTTTGCAATGAGCCCTGTCGG
GTGA
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