CX294553

Overview
NameCX294553
Unique NameCX294553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11426 contig Ccv1_Contig11426:926..1520. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.233e-43
Identity = 81/91 (89.01%), Postives = 88/91 (96.70%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAGT 273
            HKRMPPEAID ASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP PPLFNFKQE++G+SPELVNKLIPDH+KRQLGL+FL+ +GT
Sbjct:  290 HKRMPPEAIDFASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQEVAGSSPELVNKLIPDHIKRQLGLSFLNQSGT 380          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40
Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLNFLHPAG 270
            HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF+ELREPNARLPNGRPLPPLFNFKQELSGASPEL+N+LIP+HV+RQ+   F   AG
Sbjct:  322 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHVRRQMNGGFPFQAG 411          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38
Identity = 73/81 (90.12%), Postives = 79/81 (97.53%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 243
            HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF+ELREPNARLPNGRPLPPLFNFKQEL GAS EL+N+LIP+HV+RQ+
Sbjct:  320 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQELGGASMELINRLIPEHVRRQM 400          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.016e-31
Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 1
Query:    4 KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 261
            KR+PPEA+DL  R  QYSP+LRCTA+EAC HPFFDELR+PNARLPNGRPLPPLFNFK QELSG  PE V++L+P+H ++Q     LH
Sbjct:  333 KRLPPEAVDLLCRFFQYSPNLRCTAVEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFMALH 419          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 9.163e-31
Identity = 61/87 (70.11%), Postives = 71/87 (81.61%), Query Frame = 1
Query:    4 KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGLNFLH 261
            KR+PPEA+DL  R  QYSP+LRCTALEAC HP FDELR+PN RLPNGRPLPPLFNFK QELSG  PE+VN+L+P+H ++Q     LH
Sbjct:  334 KRLPPEAVDLLCRFFQYSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFMALH 420          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.939e-30
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 240
            HKR PPEA+DL SRLLQYSP+LR TA+EA  HPFFDELR+PN RLPNGR LPPLFNFK QEL GAS EL++KLIPDH ++Q
Sbjct:  324 HKRTPPEAVDLVSRLLQYSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARKQ 404          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 2.257e-29
Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDH 228
            HKRMPPEA+DL SRLLQYSP+LRCTALEACAHPFFD+LR+PN  LPNGR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  388 HKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 464          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.028e-29
Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPDH 228
            HKRMPPEA+DL SRLLQYSP+LRCTALEACAHPFFD+LR PN  LPNGR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  384 HKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 460          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.463e-28
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 240
            HKRMPPEA+DL SRLLQYSP+LRC AL++  HPFFDELR+PNARLPNGR LPPLFNFK  EL G   E+V KL+P+H ++Q
Sbjct:  323 HKRMPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQ 403          
BLAST of CX294553 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.495e-28
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 1
Query:    1 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 240
            HKRMPPEA+DL SRLLQYSP+LRCTALEA  H FFDELR+PN RLPNGR LPPLFNFK  EL G S E + KL+P+H ++Q
Sbjct:  323 HKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELRDPNTRLPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARKQ 403          
The following BLAST results are available for this feature:
BLAST of CX294553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
KSG7_ARATH1.233e-4389.01Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG6_ARATH1.276e-4086.67Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH2.660e-3890.12Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG4_ARATH7.016e-3170.11Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG10_ARATH9.163e-3170.11Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG5_ARATH5.939e-3076.54Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG8_ARATH2.257e-2979.22Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA5.028e-2979.22Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG3_ARATH1.463e-2871.60Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK1_TOBAC2.495e-2872.84Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]

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Properties
Property NameValue
Genbank descriptionC05054B05SK FlavRip1 Citrus clementina cDNA clone C05054B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294553 ID=CX294553; Name=CX294553; organism=Citrus clementina; type=EST; length=595bp
CACAAACGGATGCCTCCTGAGGCTATTGATCTCGCTTCACGCCTGTTGCA
GTATTCACCAAGTCTCCGATGTACAGCGCTAGAAGCATGTGCACATCCTT
TCTTTGATGAACTGCGTGAGCCAAATGCTCGCCTACCAAATGGTCGCCCA
CTGCCACCTCTCTTCAACTTTAAACAGGAATTATCGGGGGCTTCACCAGA
GCTTGTTAATAAGTTGATACCAGACCATGTGAAACGGCAATTAGGTCTGA
ATTTCTTGCATCCAGCCGGGACATAGGCCTAGACAAGTAATATAGAAGTG
AAATCTACTTGGTGATGTGTAGCACAAAGGGAATTATATCCTTGTTCGTA
ACTGCCATGCATTGAGGCTTAATCAGCATCAGTTGTTGCTCGATCAGCAA
GCCTACATTCTCAGGCTGCTATGCTTTCTTGGTGCCTTCTTTTTCTGCTT
TTCCATCCTCCTGTGTCTCCTCCCCACTTCGTCCCACCCCCCCTCCTCTG
TTAAAGTTCCCATTTGTTTATGTACATGTTTGATAGTAAAGATAGGTTAA
GTTGATAAGGTGGACTGATCAGACCGCTGCTAGTAGAGGAAAAAC
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