CX294568

Overview
NameCX294568
Unique NameCX294568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15049 contig Ccv1_Contig15049:276..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294568 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.675e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 3 
Query:   66 MGGGNGQKSKMAREKNMEKQRAAGKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLKK 299
            MGGGN QKS MAR KN+EK +AAGKGSQLE+NKKAMSIQCKVCMQTFICTTSEVKC+EHAEA+HPK+D+  CFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CX294568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH4.675e-3483.33Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC05054D04SK FlavRip1 Citrus clementina cDNA clone C05054D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294568 ID=CX294568; Name=CX294568; organism=Citrus clementina; type=EST; length=456bp
ATTATTTTGGGTATTTTTATTCGTAACTTAACGATTCCTGTTAGCTTCTG
TGGTTTGTAAAGGAAATGGGAGGCGGCAACGGCCAGAAATCAAAGATGGC
TCGTGAGAAGAACATGGAGAAGCAGAGAGCAGCTGGCAAGGGGAGTCAGC
TGGAGTCAAACAAGAAAGCCATGTCCATCCAGTGCAAGGTATGCATGCAG
ACGTTCATTTGCACCACATCTGAGGTGAAGTGCAAGGAACATGCCGAAGC
CAGACACCCCAAATCTGATTTATTTACATGTTTCCCCCATTTAAAGAAAT
GAAAAACCAATAATTTGATTATGTATTTGGAGATGGGTTTAAAGCCCTCG
TCAGTATGTGTCTTGCTGTGGGTTAAAATTAGAAAGATTTTGGGAAAAAG
AGGGATCCTTCCAGTCTTATCAATACTAATAATTAACTATTTGCAAAAAA
AAAAAA
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