CX294570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 309.301 bits (791), Expect = 1.127e-83 Identity = 158/184 (85.87%), Postives = 169/184 (91.85%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 G KIDYVFK+VLIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQT+TL I + VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR VPTEDAKEFAE+E L FMETSALESTNVE AF+TVLTEIYRIVSKK L AN+ Sbjct: 9 GEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 1.800e-81 Identity = 149/184 (80.98%), Postives = 171/184 (92.93%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 G+ + KIDYVFK+VLIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TL I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML+GNK+DLE RAVPTEDAKEFA+KEGL F+ETSA+E+TN+E AFLTVLTEI+ IV+KK L A+D Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADD 189
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 6.839e-81 Identity = 150/184 (81.52%), Postives = 168/184 (91.30%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 G+ N KIDYVFK+VLIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNK DL R VPTEDAKEFAEKEGL F+ETSALE+TNVE AF TVLTEIY IV+KK+L A++ Sbjct: 8 GDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADE 191
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.433e-80 Identity = 147/184 (79.89%), Postives = 170/184 (92.39%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 G+ + KIDYVFK+VLIGDSAVGK+Q+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML GNK+DLE RAVPTEDAKEFA+KEGL F+ETSA+E+T +E AFLTVLTEI+ IV+KK L A++ Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADE 189
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.431e-70 Identity = 129/181 (71.27%), Postives = 153/181 (84.53%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 +++ DY+FKIVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL+ LRAV ED + AEKEGL F+ETSALE+ N+E AF T+LTEIY I+SKKAL A + Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQE 186
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.580e-69 Identity = 129/181 (71.27%), Postives = 152/181 (83.98%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 +++ DY+FKIVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV +D +EKEGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A + Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE 186
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.580e-69 Identity = 126/181 (69.61%), Postives = 157/181 (86.74%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 613 GN +++ DY+FK+VLIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.696e-69 Identity = 128/181 (70.72%), Postives = 155/181 (85.64%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 +++ DY+FK+VLIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TKTL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVPTED K FAE+E L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGD 187
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 7.843e-69 Identity = 125/181 (69.06%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 613 G +++ DY+FK+VLIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 7.843e-69 Identity = 125/181 (69.06%), Postives = 156/181 (86.19%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 613 G +++ DY+FK+VLIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182 The following BLAST results are available for this feature:
BLAST of CX294570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294570 ID=CX294570; Name=CX294570; organism=Citrus clementina; type=EST; length=660bpback to top |