CX294578

Overview
NameCX294578
Unique NameCX294578
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX294578_ssr79 microsatellite CX294578_ssr79:79..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTL2B_DANRE (CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.540e-53
Identity = 101/183 (55.19%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+    T +P L P +TRS P             H +L   DDA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDP+++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF DR+D ELL+L+PF
Sbjct:  251 PYFFIKHVPPLTEEQLTRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELDDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDSELLKLVPF 432          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTL2A_DANRE (CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.652e-53
Identity = 99/183 (54.10%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+    T +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  +I+DNSPQAF +Q+ NGIPIESWF D++D ELL+L+PF
Sbjct:  260 PYFFIKHVPPLTEEQLTRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKNDNELLKLVPF 441          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTL2B_XENLA (CTD small phosphatase-like protein 2-B OS=Xenopus laevis GN=ctdspl2b PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.646e-52
Identity = 99/183 (54.10%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D+ELL+L+PF
Sbjct:  257 PYFFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPF 438          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTL2A_XENLA (CTD small phosphatase-like protein 2-A OS=Xenopus laevis GN=ctdspl2a PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.646e-52
Identity = 99/183 (54.10%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D+ELL+L+PF
Sbjct:  257 PYFFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPF 438          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_XENTR (CTD small phosphatase-like protein 2 OS=Xenopus tropicalis GN=ctdspl2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.150e-52
Identity = 99/183 (54.10%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D+ELL+L+PF
Sbjct:  257 PYYFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPF 438          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_RAT (CTD small phosphatase-like protein 2 OS=Rattus norvegicus GN=Ctdspl2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.808e-52
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D ELL+L+PF
Sbjct:  256 PYYFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPF 437          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_MOUSE (CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.808e-52
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D ELL+L+PF
Sbjct:  256 PYYFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPF 437          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_HUMAN (CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.808e-52
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D ELL+L+PF
Sbjct:  257 PYYFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPF 438          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_CHICK (CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.808e-52
Identity = 99/183 (54.10%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            PY FIK++P L+      +P L P +TRS P             H +L   +DA  TFPV F    + VYVR RP+ ++FLER+S ++EII+FTAS+ +YA++LLN+LDPK++L RHR+FRE CV V GNY+KDL++LGRDLS  II+DNSPQAF +Q+ NGIPIESWF D++D ELL+L+PF
Sbjct:  257 PYYFIKHVPPLTEEQLNRKPAL-PLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPF 438          
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTSL2_DICDI (CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.171e-52
Identity = 96/183 (52.46%), Postives = 133/183 (72.68%), Query Frame = 2
Query:   77 PYLFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625
            P+LFIK L   +++ P   P+ LP +  S P             H + EP +    TFPV FN  ++ V+ + RP+ ++FL +VS +FE+IIFTASQ +YA +LLN++DP  K+ ++R++R+SCV+VDGNYLKDLSVLGRDL  V+I+DNSPQ+FGFQVDNGIPIESWF+D +D+ELL+L+PF
Sbjct:  362 PFLFIKQLANATTMPP---PVALPPKEHSSPKISLVLDLDETLVHCSTEPLEQPHLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKI-KYRLYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPF 540          
The following BLAST results are available for this feature:
BLAST of CX294578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
CTL2B_DANRE2.540e-5355.19CTD small phosphatase-like protein 2-B OS=Danio re... [more]
CTL2A_DANRE9.652e-5354.10CTD small phosphatase-like protein 2-A OS=Danio re... [more]
CTL2B_XENLA1.646e-5254.10CTD small phosphatase-like protein 2-B OS=Xenopus ... [more]
CTL2A_XENLA1.646e-5254.10CTD small phosphatase-like protein 2-A OS=Xenopus ... [more]
CTSL2_XENTR2.150e-5254.10CTD small phosphatase-like protein 2 OS=Xenopus tr... [more]
CTSL2_RAT2.808e-5254.10CTD small phosphatase-like protein 2 OS=Rattus nor... [more]
CTSL2_MOUSE2.808e-5254.10CTD small phosphatase-like protein 2 OS=Mus muscul... [more]
CTSL2_HUMAN2.808e-5254.10CTD small phosphatase-like protein 2 OS=Homo sapie... [more]
CTSL2_CHICK2.808e-5254.10CTD small phosphatase-like protein 2 OS=Gallus gal... [more]
CTSL2_DICDI8.171e-5252.46CTD small phosphatase-like protein 2 OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionC05054F02SK FlavRip1 Citrus clementina cDNA clone C05054F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294578 ID=CX294578; Name=CX294578; organism=Citrus clementina; type=EST; length=635bp
TGATGAGTATGGTCAAGAGTCTATGACTGATGTTTGCATGGAGGATGATG
ACTATGAGGAATTTGATGACTTTGATCCTTATTTATTTATAAAAAACTTG
CCAGAATTGTCATCAGTGGTCCCCACTTTTCGGCCTATGTTGCTACCTAA
GCAGACACGGAGTTGCCCCCCTACTACTCTTGTTTTGGACTTGGACGAAA
CTCTGGTGCATTCCACTCTAGAGCCCTGTGATGATGCAGACTTCACATTC
CCTGTAAATTTTAACCTCCAAAAGCATACAGTTTATGTTCGATGCCGTCC
TTATCTCAAAGATTTCTTGGAGAGAGTTTCCAGTCTTTTTGAGATAATCA
TATTCACCGCCAGTCAAAGTATCTATGCAGAGCAGCTTCTAAATGTGCTC
GATCCTAAGAGAAAATTATTTCGGCATCGTGTTTTCCGTGAATCATGTGT
TTTTGTGGATGGCAATTACCTCAAAGATTTGTCAGTTCTTGGCCGTGATT
TGTCACATGTTATCATAGTTGACAACTCCCCACAGGCATTCGGGTTCCAA
GTGGACAATGGAATTCCAATTGAGAGCTGGTTTGATGATCGATCAGATCA
AGAATTGCTTCGATTACTACCATTTTTTGGAGAGC
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