CX294586
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.515e-48 Identity = 99/179 (55.31%), Postives = 124/179 (69.27%), Query Frame = 2 Query: 2 YEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQELESAGPSSQSSRLQTFISFAGEKEVVIK-NLSKKRKLERAS 535 Y+KAL DGP GGV+AV+DERAY+E+FLS RCEF I+GQEFT+ GWGFAFPR+SPLAVD+S AIL+LSENGD+QRI DKWL R ACS QGA+ E DRL LKSFW +Y + ++RQF + + E SS S+R+ +F+SF EKE K S++R+LE S Sbjct: 717 YDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQFGQQCPEEAEGSIRRRSSPSARIHSFLSFVKEKEEDAKARSSRERQLEDIS 895
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.584e-48 Identity = 100/205 (48.78%), Postives = 131/205 (63.90%), Query Frame = 2 Query: 2 YEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLD-----LQELESAGPSSQSSRLQTFISFAGEKEVVIKNLSKKRKLERASTGDIDKDKSTDGDLNGSVNPGN 601 Y KAL DGP GGV+A++DER Y+E+FLS+ C + I+GQEFT+ GWGFAFPRDSPLA+D+S AILEL+ENGDLQRIHDKWL ++AC+ + A+ E+DRLHLKSFW +Y +QI+RQ + D Q+ S +S+RLQ F+S EKE K+ SKKRK++ + +S D S N N Sbjct: 727 YAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKE-ESKHESKKRKIDGSMNDTSGSTRSRGFDRERSFNSVN 930
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 82/168 (48.81%), Postives = 110/168 (65.48%), Query Frame = 2 Query: 29 KNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQG---AKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQELESAGP-SSQSSRLQTFISFAGEKEVVIKNLSKKRK 520 +NG V+A++DER Y+++FLS C F+I GQEFTR GWGFAFPRDSPLA+DMS AIL LSE G LQ+IHDKWL+RS CS+ + +++++L L+SFW IY +IVR F RH +E P SS+S LQTF+++ EKE K K+++ Sbjct: 733 QNGTVAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKYDEEATVPSPESSRSKSLQTFLAYFDEKEDESKRRMKRKR 900
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 82/169 (48.52%), Postives = 112/169 (66.27%), Query Frame = 2 Query: 29 KNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQGAKQEAD--RLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQELESAGPSSQSSR---LQTFISFAGEKEVVIKNLSKKRK 520 +NG V+A++DER Y+++FLS C+F+I GQEFTR GWGFAFPRDSPLAVDMS AIL LSE G+LQ+IHD+WL++S CSS Q D +L++ SFW I+ +I+R F + ++ +E A PS +SSR LQTF++F EKE K K+++ Sbjct: 733 QNGTVAAIVDERPYIDLFLSDYCKFAIRGQEFTRCGWGFAFPRDSPLAVDMSTAILGLSETGELQKIHDRWLSKSNCSSPHGSQSGDSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCKDTPEV-VVEEAIPSPKSSRLTKLQTFLAFVDEKEEETKRRLKRKR 900
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.602e-36 Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 2 Query: 2 YEKALTDGPKNGGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQGAK---QEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLD-----LQELESAGPSSQS--SRLQTFISFAGEKEVVIKNLSKKR 517 Y+KAL GP GGV+A++DER Y+E+FL +F+++G EFT+ GWGFAFPRDSPL+VD+S AILELSENGDLQRIHDKWL S A Q+ DRL + SF I+ + Q++RH + LQ S G S S S+LQ+F+SFA +E I+ +K++ Sbjct: 729 YKKALDLGPSKGGVAAIVDERPYIELFLYQNPKFAVVGSEFTKSGWGFAFPRDSPLSVDLSTAILELSENGDLQRIHDKWLASDMSSMSQASELDQDPDRLDVYSFSALFLICGLACIFALAIHACNLFYQYSRHAAEEDPAALQPSASDGSRSLSRRSKLQSFLSFADRREADIRRAAKEK 910
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.896e-31 Identity = 80/190 (42.11%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 2 YEKALTDGPKNGGVSAVIDERAYMEVFLS-TRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLT-RSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQELESAGPSSQSSRLQTFISFAGEKEVVIKNLSKKRKLERASTGDIDKDKST 565 Y AL GP GGV+A++DE Y+EV L+ + C+F +GQEFTR GWGFAF RDSPLAVDMS AIL+LSE G+L++IH KWL + CS Q + E +L LKSFW ++ ++ Q+ R + + E AG S+ SR S G + K L K A +I K KS+ Sbjct: 754 YLSALQRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEERAGEVSEPSR-----SGRGSRAPSFKELIKVVDKREAEIKEILKQKSS 938
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.986e-29 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 2 YEKALTDGPKN-GGVSAVIDERAYMEVFLSTRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRSACSSQGA-KQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQELESAGPSSQSS----RLQ----TFISFAGEKEVVIKNLSKK 514 YEKAL GP N GGV+A++DE Y+E+FL+ R F I+G+ F GWGFAF RDSPLA+DMS AIL+LSE LQ I KWL ++ C+ + E ++LHLKSF +++++++RQF R Y ++ S +S S+ RL+ F+ F EKE IK + ++ Sbjct: 719 YEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVR-YRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRR 898
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.248e-26 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 2 Query: 2 YEKALTDGPKNGGVSAVIDERAYMEVFLS-TRCEFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWLTRS-ACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFAR-HYLDLQELESAGPSSQSSR--------LQTFISFAGEKEVVIKNLSKKRKLERASTGDIDKDKSTDGD 574 Y AL GP+ GGV+A++DE Y++ LS + C+F +GQEFTR GWGFAF RDSPLAVDMS AIL+L+E G L++I KWLT C+ Q + E ++ ++SFW ++ ++ Q+ R + E+++ + SSR + I ++E IK + K++ ++ G + S D Sbjct: 747 YLSALQRGPRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGVVWFIALTLFCWKVFWQYQRLRPEESDEVQARSEEAGSSRGKSLRAVSFKDLIKVVDKREAEIKEMLKEKSSKKLKDGQSSAENSQSKD 948
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 32 NGGVSAVIDERAYMEVFLSTRC-EFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKW-LTRSACSSQGAKQEADRLHLKSFW 313 NG +SA DE AY+ LS C +++I+ F G+GFAFPR+SPL D+S AIL +++ ++Q I +KW + ++ C ++RL L+SFW Sbjct: 723 NGSISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFW 818
BLAST of CX294586 vs. ExPASy Swiss-Prot
Match: GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 29 KNGGVSAVIDERAYMEVFLSTRC-EFSIIGQEFTRIGWGFAFPRDSPLAVDMSIAILELSENGDLQRIHDKWL-TRSACSSQGAKQEADRLHLKSF 310 K+ G++A DE AY++ LS C ++ ++ F G+GFAFP++SPL + S AIL L++N Q+I D+W ++ C ++RL+L SF Sbjct: 714 KSKGIAAAFDEVAYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSSF 809 The following BLAST results are available for this feature:
BLAST of CX294586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294586 ID=CX294586; Name=CX294586; organism=Citrus clementina; type=EST; length=651bpback to top |