CX294598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGD12_ARATH (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 4.253e-90 Identity = 163/213 (76.53%), Postives = 186/213 (87.32%), Query Frame = 3 Query: 3 DLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI-----ASGKPSASLQSSFSRKIIDSFRSTNSSQKKDV-GMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELM 623 DLL Q DNR+CADCGAPDPKWASANIGVFICLKCCGVHRSLG+H+SKVLSVTLD+WSD+EVD+MIE+GGN+SAN+IYEAFIPEG SKPGPD+SH+ R +FIRSKYE QEFLKPSLRI +S K A L SS S+KI+DSFR+ +SSQ+ + GMVEFIGLLKV + KG N+AIRDMMSSDPYVVL LGQQ Q+T+VKSNLNPVWNEELM Sbjct: 20 DLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQEFLKPSLRITSVRGSSTKTPAFLSSSLSKKIVDSFRTNSSSQQPQLEGMVEFIGLLKVTIKKGTNMAIRDMMSSDPYVVLTLGQQKAQSTVVKSNLNPVWNEELM 232
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGD13_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 8.867e-88 Identity = 160/212 (75.47%), Postives = 183/212 (86.32%), Query Frame = 3 Query: 3 DLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASG----KPSASLQSSFSRKIIDSFRSTNSSQKK-DVGMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELM 623 DLL Q DNR+CADCGA DPKWASANIGVFICLKCCGVHRSLGTH+SKVLSVTLD+WSD+EVD+MIE+GGN+SAN+IYEAF+P+ SKPGPD +H+ R +FIR+KYELQEFLKPSLRI SG K SA L SS SRKI+DSFR+ +SSQ GMVEFIGLLKV + KG NLAIRDMMSSDPYVVL LG+Q +QTT++ SNLNPVWN+ELM Sbjct: 20 DLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFLPDTCSKPGPDVNHDQRMRFIRAKYELQEFLKPSLRITSGKGSTKSSAFLTSSLSRKIMDSFRTNSSSQTMFQEGMVEFIGLLKVTIKKGTNLAIRDMMSSDPYVVLNLGKQKLQTTVMNSNLNPVWNQELM 231
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGD11_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.292e-58 Identity = 113/228 (49.56%), Postives = 154/228 (67.54%), Query Frame = 3 Query: 6 LLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPS----------LRIASGKPS--ASLQSSFSRKIIDSFRSTNSSQKKD----------VGMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELM 623 LL Q N+ CADCG+P+PKW S ++GVFIC+KC GVHRSLG H+SKVLSV LD+W+DD+VD ++ GGN++ N +EA + KP PDS++E R+ FIR KYE +F+ P R + PS ++ S +I +FR++ ++ D GMVEF+GL+KV VVKG NLA+RD+M+SDPYV+L LGQQ+V+T ++K+NLNPVWNE LM Sbjct: 53 LLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDMLVGYGGNTAVNERFEACNIDQSKKPKPDSTNEERNDFIRKKYEQHQFMDPKDGALCTYQQPSRTNTSPPSLCSASHRSTKNRIGHAFRNSWGRRESDHKGPKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTRVIKNNLNPVWNETLM 280
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 3 Query: 3 DLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 353 +LLL+ DN+ CADC + P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M E+ GN AN +YEA++PE +P D + E FIR KYE ++++ SL I Sbjct: 18 NLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDPAVE---GFIRDKYEKKKYMDRSLDI 130
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP2_HUMAN (Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 3 Query: 3 DLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 353 +LLL+ DN+ CADC + P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M E+ GN AN +YEA++PE +P D + E FIR KYE ++++ SL I Sbjct: 18 NLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDPAVE---GFIRDKYEKKKYMDRSLDI 130
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP2_BOVIN (Stromal membrane-associated protein 2 OS=Bos taurus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 3 Query: 3 DLLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 353 +LLL+ DN+ CADC + P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M E+ GN AN +YEA++PE +P D + E FIR KYE ++++ SL I Sbjct: 18 NLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDHAVE---GFIRDKYEKKKYMDRSLDI 130
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.297e-27 Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 3 Query: 6 LLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 353 LL + +N+ CADC A P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M E+ GN AN +YEAF+PE +P D + E FIR KYE ++++ S+ I Sbjct: 19 LLSEEENKYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAFLPENFRRPQTDQAVE---GFIRDKYEKKKYMDRSIDI 130
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: CEG1A_DROME (Centaurin-gamma-1A OS=Drosophila melanogaster GN=cenG1A PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.317e-26 Identity = 56/118 (47.46%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASGKPSAS 377 N C DCGAP+P+WAS N+GV +C++C GVHR+LG+H+SKV S+ LDDW + M+ + GNS AN+++E+ + V KP +S E + +++RSKYE +EFL P +S PS S Sbjct: 714 NGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAI-GNSLANSVWESNTRQRV-KPTSQASREDKERWVRSKYEAKEFLTPLGNGSSAHPSPS 829
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.646e-25 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 6 LLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFL-KPSLRI----ASGKP------SASLQSSFSRKIIDSFRSTNSSQKK 443 LL + DN+ CADC A P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M ++ GN+ A +YEA +PE +P D + E FIR KYE +++ K ++ I +S P S SLQ++ + ++ + +KK Sbjct: 24 LLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDM-GNTKARLLYEANLPENFRRPQTDQAVEF---FIRDKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKK 176
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 6 LLLQRDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEF 332 LL + DN+ CADC A P+WAS NIGVFIC++C G+HR+LG H+S+V SV LD W+ +++ M ++ GN+ A +YEA +PE +P D + E FIR KYE +++ Sbjct: 24 LLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDM-GNTKARLLYEANLPENFRRPQTDQAVEF---FIRDKYEKKKY 128 The following BLAST results are available for this feature:
BLAST of CX294598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294598 ID=CX294598; Name=CX294598; organism=Citrus clementina; type=EST; length=623bpback to top |