CX294715

Overview
NameCX294715
Unique NameCX294715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6637 contig Ccv1_Contig6637:8..498. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 4.024e-64
Identity = 120/146 (82.19%), Postives = 133/146 (91.10%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MDFR+MGL+S PLF TLQHMM+M  D + DNK+ NAPT +YVRDAKAMAATPADVKEYPNSYVF +DMPGLKSGDIKVQVEDDN+LLI GERKR+EEK+GAKY+RMERRVGK MRKFVLPENAN +AISAVCQDGVL+VTV KLPP
Sbjct:    1 MDFRVMGLES-PLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPP 145          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 3.766e-62
Identity = 116/146 (79.45%), Postives = 130/146 (89.04%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD R++G+D++PLF TL HMME   +DS      NAP++ YVRDAKAMAATPADVKEYPNSYVF+VDMPGLKSGDIKVQVE+DNVLLISGERKREEEK+GAK++RMERRVGKFMRKF LPENAN +AISAVCQDGVLTVTV KLPP
Sbjct:    1 MDLRLLGIDNTPLFHTLHHMMEAAGEDSV-----NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPP 141          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.638e-57
Identity = 111/141 (78.72%), Postives = 127/141 (90.07%), Query Frame = 3
Query:   69 MGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            M LDS PLF+TL H+M++   D    K+ NAPTRTYVRDAKAMAATPADVKE+PNSYVF+VDMPG+KSGDIKVQVED+NVLLISGERKREEEK+G KY++MERR+GK MRKFVLPENAN+EAISA+ QDGVLTVTV+KLPP
Sbjct:    1 MDLDS-PLFNTLHHIMDL--TDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPP 138          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 6.440e-54
Identity = 110/147 (74.83%), Postives = 124/147 (84.35%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKRE-EEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD R+MG D  PLF    H+M+   DD + N  S+AP+RT++ DAKAMAATPADVKEYPNSYVFI+DMPGLKSGDIKVQV+ DNVL ISGERKRE EEK+GAKYVRMERRVGK MRKFVLPENAN E I+AVCQDGVLTVTV+ +PP
Sbjct:    1 MDLRLMGFDH-PLF---HHIMDYAGDDKSSN--SSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPP 141          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 9.299e-53
Identity = 103/143 (72.03%), Postives = 122/143 (85.31%), Query Frame = 3
Query:   66 IMGLDSSPLFSTLQHMMEMGADDSADNKSSNA-PTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            +MG D  PL   L +++E   D++  NKS+N+ P+R YVRDA+AMAATPADVKE PNSYVFIVDMPGLKSGDIKVQVE DNVL+ISG+R REEEK+G KYVRMERR+GKFM+KF LPE+AN + ISA+CQDGVLTVTV+KLPP
Sbjct:    6 LMGFD--PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPP 146          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 7.368e-50
Identity = 104/153 (67.97%), Postives = 119/153 (77.78%), Query Frame = 3
Query:   54 MDFRIMGLDS----SPLFSTLQHMMEMGAD-DSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGER--KREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD R  GL +      L ST+Q M++   D D A       P R YVRDAKAMAATPADVKEYPNSYVFI DMPG+K+ +IKVQVEDDNVL++SGER  + ++EKDG KY+RMERRVGKFMRKFVLPENANVEAI+AV QDGVL VTV+KLPP
Sbjct:    1 MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPP 153          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49
Identity = 96/151 (63.58%), Postives = 125/151 (82.78%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNK--SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD  + GL++ PL + LQH++++   D+    DNK  S  + TRTYVRDA+AMAATPADVKE P +Y F+VDMPGL +GDI+VQVED+ VL++SGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+KLPP
Sbjct:    1 MDAVMFGLET-PLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPP 150          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 6.896e-48
Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD R+ GL++ PL   LQH++++   D+    D      PTRTYV DA+AMA TPADVKE P +Y F+VDMPGL +GDIKVQVED+ VL+ISGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+++ ISAVC+DGVLTVTV+KLPP
Sbjct:    1 MDGRMFGLET-PLMVALQHLLDVPDGDAGAGGDKAGGGGPTRTYVADARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERED-AKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPP 147          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 6.454e-46
Identity = 92/146 (63.01%), Postives = 119/146 (81.51%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            MD R+ GL++ P  + L H++++   D    K+    TRTYVRDA+AMAATPADVKE   +Y F+VDMPGL +GDI+VQVED+ VL+ISGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+KLPP
Sbjct:    1 MDARMFGLET-PRVAALHHLLDVPDGD----KAGGGATRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERED-AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPP 140          
BLAST of CX294715 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 8.430e-46
Identity = 93/153 (60.78%), Postives = 124/153 (81.05%), Query Frame = 3
Query:   54 MDFRIMGLDSSPLFSTLQHMMEM--GADDSADNK-SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKR----EEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDKLPP 491
            M+  + GL++ PL + LQH++++  G   +A  + ++  PTR YVRDA+AMAATPADVK+ P +Y F+VDMPGLKS DIKVQVE++ +L+ISGER+R    EE+++  KY+RMERR+GKFMRKFVLP+NA+V+ ISAVCQDGVLTVTV+KLPP
Sbjct:    1 MESAMFGLET-PLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPP 152          
The following BLAST results are available for this feature:
BLAST of CX294715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
HSP21_SOYBN4.024e-6482.1917.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_SOLPE3.766e-6279.4517.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_PEA1.638e-5778.7217.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_IPONI6.440e-5474.8317.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN9.299e-5372.0317.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP22_IPONI7.368e-5067.9718.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_MAIZE8.146e-4963.5817.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE6.896e-4864.4317.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP23_MAIZE6.454e-4663.0117.0 kDa class II heat shock protein OS=Zea mays G... [more]
HSP18_ORYSJ8.430e-4660.7818.0 kDa class II heat shock protein OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC05055A12SK FlavSen1 Citrus clementina cDNA clone C05055A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294715 ID=CX294715; Name=CX294715; organism=Citrus clementina; type=EST; length=491bp
GAATCCTCATTTGGCAGTAGCAAACATCAACAACAGCTAATACTCGCAAA
AGAATGGATTTCAGAATCATGGGTTTGGACTCATCGCCACTCTTTTCAAC
TCTGCAGCACATGATGGAGATGGGGGCGGACGACTCCGCTGACAACAAGT
CATCCAACGCGCCGACGCGCACGTACGTGAGAGACGCCAAGGCAATGGCG
GCGACGCCTGCGGACGTGAAGGAGTATCCGAACTCGTACGTGTTCATCGT
CGATATGCCCGGACTGAAGTCGGGGGACATCAAGGTCCAAGTGGAGGACG
ACAATGTGCTGCTCATAAGCGGTGAGAGGAAGCGGGAGGAGGAGAAAGAT
GGGGCCAAGTATGTGAGAATGGAGAGGAGGGTTGGCAAGTTTATGAGGAA
ATTTGTGCTGCCTGAGAATGCTAACGTTGAAGCCATTTCGGCGGTGTGTC
AGGACGGAGTGTTGACTGTGACTGTCGATAAGCTGCCACCG
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