CX294726

Overview
NameCX294726
Unique NameCX294726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig571 contig Ccv1_Contig571:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 5.119e-82
Identity = 146/199 (73.37%), Postives = 170/199 (85.43%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNP-KMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDD 594
            VNA+LSNP  Y ++   AGDAQARD LERV+ECLD++KCE FQD ITWARLKFEDYFSNRVKQL FTFPED+ TS+GAPFWSAPKRFP P++FSS+DPS L F++AA+ILRAETFGIPI +W K P K+ AEAVDKV+VPDF PK+  KI+TDEKAT+LS+ASVDDAAVI +LI KLE+  K LPSGF + PIQFEKDD
Sbjct:  657 VNAFLSNPTTYISAARTAGDAQARDQLERVIECLDRDKCETFQDSITWARLKFEDYFSNRVKQLTFTFPEDSMTSSGAPFWSAPKRFPRPVEFSSSDPSQLSFILAAAILRAETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDD 855          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 3.318e-81
Identity = 145/199 (72.86%), Postives = 169/199 (84.92%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNP-KMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDD 594
            VNA+LSNP  Y ++   AGDAQARD LERV+ECLD++KCE FQD ITWARLKFEDYFSNRVKQL FTFPED+ TS+GAPFWSAPKRFP P++FSS+D S L F++AA+ILRAETFGIPIP+W K P K+ AEAVDKV+VPDF PK+  KI+T EKAT+LS+ASVDDAAVI +LI KLE+  K LPSGF + PIQFEKDD
Sbjct:  657 VNAFLSNPTTYISAARTAGDAQARDQLERVIECLDRDKCETFQDSITWARLKFEDYFSNRVKQLTFTFPEDSMTSSGAPFWSAPKRFPRPVEFSSSDQSQLSFILAAAILRAETFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDD 855          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 7.916e-75
Identity = 132/198 (66.67%), Postives = 161/198 (81.31%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDD 594
            VN++LSNP +Y  +M  AGDAQAR+ LERV ECL+K++C  F DCI+WARLKFEDYFSNRVKQL FTFPEDAATS GAPFWSAPKRFP  LQFS+AD SHL+F+M+ASILRAE+FG+ IP+W K+   LA+ V+K+ VP F PK+   I+TDEKA+ LS+ SVDD AVI DL+ KL++  K L  GF++KPIQFEKDD
Sbjct:  660 VNSFLSNPAQYAAAMRKAGDAQARELLERVSECLNKDRCSTFDDCISWARLKFEDYFSNRVKQLTFTFPEDAATSMGAPFWSAPKRFPRALQFSAADQSHLNFIMSASILRAESFGVAIPEWAKDTSKLADVVNKIAVPTFEPKQGVNIVTDEKASNLSSTSVDDVAVIEDLLAKLQEYAKMLLPGFQMKPIQFEKDD 857          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 4.859e-32
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDD 594
            VN YL++P     ++  AG  Q  + LE V   L  ++ + + DC+TWA   +   +SN ++QL+  FP D  TS+GAPFWS PKR PHPL F   +P HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDD
Sbjct:  663 VNQYLTDPKFVERTLRLAG-TQPLEVLEAVQRSLVLQRPQTWADCVTWACHHWHTQYSNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNPLHLDYVMAAANLFAQTYGL---TGSQDRAAVATFLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDD 853          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.859e-32
Identity = 78/203 (38.42%), Postives = 117/203 (57.64%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDD 594
            VN YL++P     ++  AG  Q  + LE V   L  ++ + + DC+TWA   +   +SN ++QL+  FP D  TS+GAPFWS PKR PHPL F  ++P HL +V+AA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDD
Sbjct:  663 VNQYLTDPKFVERTLRLAG-TQPLEVLEAVQRSLVLQRPQTWADCVTWACHHWHTQYSNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVIAAANLFAQTYGL---TGSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPEKLPGFKMYPIDFEKDD 853          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.346e-32
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDD 594
            VN YL++P     ++  AG  Q  + LE V   L  +  + + DC+TWA   +   +SN ++QL+  FP D  TS+GAPFWS PKR PHPL F  ++P HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDD
Sbjct:  663 VNQYLTDPKFVERTLRLAG-TQPLEVLEAVQRSLVLQLPQSWADCVTWACHHWHTQYSNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYVMAAANLFAQTYGLA---GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDD 853          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.197e-30
Identity = 73/200 (36.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKM--LAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDD 594
            VN YL+ P     ++  +GD +    LE + + L   K   F+DCI WARL+FE  F++ +KQL+F FP+DA TS G PFWS  KR P PL+F   +  H HFV+A + LRA  +GI   D    P +      +D +++P+F P  + KI  ++     +  + + +  I+ L+  L     +  +GF+L+P+ FEKDD
Sbjct:  631 VNMYLTQPNFVEQTLKQSGDVKGV--LESISDSLSS-KPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPD--PSTLAGFKLEPVDFEKDD 825          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.197e-30
Identity = 80/206 (38.83%), Postives = 112/206 (54.37%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQC---RKNLP-----SGFRLKPIQFEKDD 594
            VN+YL+NP  Y  S+         + L  +   L     + F  CI WARLKFE+YF+N ++QL++ FP+D  T+TG PFWS PKR P PL+F   +P HL F++AA+ LRA  +GI       N +++ +    V+VPDF PKK  KI T E     S+ +        D     +QC      LP     +G+++  IQFEKDD
Sbjct:  623 VNSYLTNPA-YVQSLKTQNPFVRLETLASIKASLMDRPLD-FNQCIAWARLKFEEYFNNNIEQLLYNFPKDMVTTTGTPFWSGPKRAPTPLKFDVENPLHLEFIVAAANLRAFNYGIKA---ETNIEVIQKQAANVIVPDFTPKK-VKIQTSENEPAPSSNTQQAGGDAED-----DQCDTILSQLPQPSEMAGYKINSIQFEKDD 817          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.013e-29
Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDD 594
            VN YL++      ++  AG  Q  + LE V   L  ++ + + DC+TWA   +   + N ++QL+  FP D  TS+GAPFWS PKR PHPL F   +  HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDD
Sbjct:  663 VNQYLTDSKFVERTLRLAG-TQPLEVLEAVQRSLVLQRPQTWGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGL---TGSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDD 853          
BLAST of CX294726 vs. ExPASy Swiss-Prot
Match: UBA1_MOUSE (Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.013e-29
Identity = 76/203 (37.44%), Postives = 113/203 (55.67%), Query Frame = 1
Query:    1 VNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTKNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS-----GFRLKPIQFEKDD 594
            VN YL++      ++  AG  Q  + LE V   L  ++ + + DC+TWA   +   + N ++QL+  FP D  TS+GAPFWS PKR PHPL F   +  HL +VMAA+ L A+T+G+     +++   +A  +  V VP+F PK   KI   ++    + ASVDD+        +LE+ +  LPS     GF++ PI FEKDD
Sbjct:  663 VNQYLTDSKFVERTLRLAG-TQPLEVLEAVQRSLVLQRPQTWGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGL---TGSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDS--------RLEELKATLPSPDKLPGFKMYPIDFEKDD 853          
The following BLAST results are available for this feature:
BLAST of CX294726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
UBE12_WHEAT5.119e-8273.37Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT3.318e-8172.86Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT7.916e-7566.67Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_HUMAN4.859e-3238.92Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_BOVIN4.859e-3238.42Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBA1_RABIT6.346e-3238.92Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA1_YEAST1.197e-3036.50Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_DICDI1.197e-3038.83Ubiquitin-like modifier-activating enzyme 1 OS=Dic... [more]
UBA1_RAT1.013e-2937.44Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]
UBA1_MOUSE1.013e-2937.44Ubiquitin-like modifier-activating enzyme 1 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionC05055C01SK FlavSen1 Citrus clementina cDNA clone C05055C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294726 ID=CX294726; Name=CX294726; organism=Citrus clementina; type=EST; length=594bp
GTGAATGCCTATCTATCCAACCCAGTTGAATACACTACTTCTATGGCTAA
TGCAGGTGATGCTCAAGCTAGAGATAACTTGGAACGTGTCCTTGAGTGCC
TTGACAAGGAGAAGTGCGAAATATTCCAGGACTGCATCACCTGGGCTCGT
CTCAAGTTTGAAGATTATTTTTCCAACCGAGTGAAGCAGTTGATCTTTAC
ATTTCCTGAAGATGCTGCTACCAGTACTGGGGCTCCATTCTGGTCTGCCC
CAAAGCGATTCCCTCATCCTCTTCAGTTCTCATCTGCGGATCCCAGTCAC
CTACACTTTGTTATGGCAGCCTCCATACTACGAGCAGAGACATTTGGCAT
CCCTATTCCTGATTGGACCAAGAATCCTAAGATGTTGGCTGAGGCTGTTG
ACAAAGTGATGGTACCAGATTTTCTGCCAAAGAAAGATGCAAAAATCTTA
ACGGATGAGAAGGCTACTACTCTCTCCACTGCTTCTGTGGATGATGCAGC
GGTAATTAATGATCTGATTATAAAGTTAGAGCAGTGCAGAAAGAACCTGC
CATCTGGGTTCAGGTTGAAACCAATTCAGTTCGAAAAGGATGAT
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